RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 WNT5BQ9H1J7 359 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RETREG1Q9H6L5 497 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CNOT10Q9H9A5 744 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SDF2L1Q9HCN8 221 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZCCHC17Q9NP64 241 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ABCF3Q9NUQ8 709 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DPP3Q9NY33 737 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SLC24A2Q9UI40 661 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KCNG2Q9UJ96 466 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ICAM5Q9UMF0 924 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GRIP1Q9Y3R0 1128 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NME7Q9Y5B8 376 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SPIN1Q9Y657 262 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CNOT1A5YKK6 2376 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MYO10Q9HD67 2058 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNFX1Q9P2E3 1918 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 LOC285556D6RIA3 1793 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF292O60281 2723 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MAPK8IP3Q9UPT6 1336 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NLRC5Q86WI3 1866 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MYO5AQ9Y4I1 1855 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 A0A1W2PPI3 338 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PRR32B1ATL7 298 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MEIS2O14770 477 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CAPN9O14815 690 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CTSVO60911 334 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SLCO2B1O94956 709 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 BAG4O95429 457 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 IGHV4-39P01824 125 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HSPA5P11021 654 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CKMT2P17540 419 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ERCC2P18074 760 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CBLP22681 906 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PCGF2P35227 344 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MTHFRP42898 656 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HOXA1P49639 335 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF41P51814 821 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DVL1P1P54792 670 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TPD52P55327 224 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 RPS18P62269 152 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 IRX3P78415 501 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 POU3F1Q03052 451 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PNRC1Q12796 327 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CAMK2DQ13557 499 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 COG2Q14746 738 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PTPRCAPQ14761 206 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 KIR2DS3Q14952 304 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 KLHL26Q53HC5 615 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HSP90AB3PQ58FF7 597 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MDH1BQ5I0G3 518 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SIRPB2Q5JXA9 342 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SLC10A5Q5PT55 438 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 GRTP1Q5TC63 336 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 KRT39Q6A163 491 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 WBP2NLQ6ICG8 309 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ZNF852Q6ZMS4 543 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 FOXL2NBQ6ZUU3 175 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TMPRSS11FQ6ZWK6 438 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ASCL5Q7RTU5 278 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DGLUCYQ7Z3D6 616 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 GPR142Q7Z601 462 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SLFN11Q7Z7L1 901 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ANKRD23Q86SG2 305 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 COMMD2Q86X83 199 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 FAM114A1Q8IWE2 563 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 GPALPP1Q8IXQ4 340 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CEP57L1Q8IYX8 460 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PI4KAP1Q8N8J0 262 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PPFIBP2Q8ND30 876 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 OR5M8Q8NGP6 311 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 OR13A1Q8NGR1 328 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ATL1Q8WXF7 558 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MRPS27Q92552 414 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SPDL1Q96EA4 605 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ZBED3Q96IU2 234 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 C17orf77Q96MU5 243 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SFXN2Q96NB2 322 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 BTBD10Q9BSF8 475 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 NAA11Q9BSU3 229 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 ACKR4Q9NPB9 350 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SLC38A7Q9NVC3 462 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PRMT7Q9NVM4 692 aaPredicted RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 OSER1Q9NX31 292 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TUBE1Q9UJT0 475 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 PADI2Q9Y2J8 665 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DDX49Q9Y6V7 483 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MYO18BQ8IUG5 2567 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 MYH8P13535 1937 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DSPP15924 2871 aaKnown RBP1.42□□□□□ -2.18
PRPF39-208ENST00000554785 SIP14410 1827 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 CEP295Q9C0D2 2601 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 IGLV5-45A0A087WSX0 123 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 A0A1W2PPM1 405 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 FEZF1A0PJY2 475 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 HYKKA2RU49 373 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TMEM221A6NGB7 291 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 TRIM77I1YAP6 450 aa1.42□□□□□ -2.18
PRPF39-208ENST00000554785 DNM1LO00429 736 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms