RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 NEIL2Q969S2 332 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 ATOH8Q96SQ7 321 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 ACTL8Q9H568 366 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 SLC22A11Q9NSA0 550 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 TXLNGQ9NUQ3 528 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 FETUBQ9UGM5 382 aa12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 PTBP2Q9UKA9 531 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 RALYQ9UKM9 306 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-208ENST00000554739 CACNA1GO43497 2377 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 A0A1B0GX78 115 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 FEZF1A0PJY2 475 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 CCDC189A1A4V9 331 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TRIM49D1C9J1S8 452 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 KERAO60938 352 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 CREG1O75629 220 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 MTHFD2P13995 350 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 RPS15AP62244 130 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 RPS18P62269 152 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 VSNL1P62760 191 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 MC1RQ01726 317 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 RHDQ02161 417 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 ACAP2Q15057 778 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 NCF4Q15080 339 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 HKDC1Q2TB90 917 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TAF1BQ53T94 588 aaPredicted RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 LGSNQ5TDP6 509 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 VN1R4Q7Z5H5 301 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 PLD6Q8N2A8 252 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 DTWD1Q8N5C7 304 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 ENDOVQ8N8Q3 282 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 PDPRQ8NCN5 879 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 RERGQ96A58 199 aaPredicted RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TM4SF19Q96DZ7 209 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 THAP11Q96EK4 314 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TSNARE1Q96NA8 513 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TMEM79Q9BSE2 394 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 SARGQ9BW04 601 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 VPS11Q9H270 941 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 CD274Q9NZQ7 290 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 NDOR1Q9UHB4 597 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 RUVBL1Q9Y265 456 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 KCNE2Q9Y6J6 123 aa12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 SNRNP200O75643 2136 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-208ENST00000554739 TXNDC9O14530 226 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 MAP2K7O14733 419 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 P2RX6O15547 441 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 RFPL1O75677 317 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 STK16O75716 305 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 KLF7O75840 302 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 IPO13O94829 963 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 WDR47O94967 919 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ITGB2P05107 769 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 FURINP09958 794 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 PRKAR1AP10644 381 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 COL6A2P12110 1019 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 GNAZP19086 355 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 GRK3P35626 688 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 BCL6P41182 706 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 GLRBP48167 497 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 MEF2AQ02078 507 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 TBR1Q16650 682 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 FBXO48Q5FWF7 155 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ATP1A1-AS1Q5TC04 95 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 FAM69BQ5VUD6 431 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 GARNL3Q5VVW2 1013 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 MLIPQ5VWP3 458 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 MRPL14Q6P1L8 145 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 WDR93Q6P2C0 686 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 C16orf46Q6P387 395 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 NXPE4Q6UWF7 544 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 SLCO4C1Q6ZQN7 724 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 OVCH1Q7RTY7 1134 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 MFSD9Q8NBP5 474 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ZNF740Q8NDX6 193 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 TTC9Q92623 222 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ESAMQ96AP7 390 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 C10orf90Q96M02 699 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 C17orf62Q9BQA9 187 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 CCDC77Q9BR77 488 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 CD244Q9BZW8 370 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 CNOT10Q9H9A5 744 aaKnown RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ZNF358Q9NW07 568 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 NUDT4Q9NZJ9 180 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 IFT80Q9P2H3 777 aaPredicted RBP12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 DYRK1BQ9Y463 629 aa12.31□□□□□ -0.44
MTHFD1-208ENST00000554739 ATRXP46100 2492 aa12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 TRBC2A0A5B9 178 aa12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 C9J4A7 227 aa12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 UBXN8O00124 270 aa12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 OR1F1O43749 312 aa12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 CNOT3O75175 753 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 STATHP02808 62 aa12.3□□□□□ -0.44
MTHFD1-208ENST00000554739 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms