RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TMEM200AQ86VY9 491 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FAM126BQ8IXS8 530 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ENDOVQ8N8Q3 282 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 COX18Q8N8Q8 333 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FCRL2Q96LA5 508 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CRAMP1Q96RY5 1269 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 KCNK4Q9NYG8 393 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PRAMEF33A0A0G2JMD5 474 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PRAMEF10O60809 474 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CDK14O94921 469 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 IFNAR1P17181 557 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 POU3F3P20264 500 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ME2P23368 584 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 GLUD2P49448 558 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 DSTNP60981 165 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SLC3A1Q07837 685 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RBM20Q5T481 1227 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MARCH9Q86YJ5 346 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM192Q8IY95 271 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 OR4C6Q8NH72 309 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 BBS10Q8TAM1 723 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 LPAR2Q9HBW0 351 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TTLL8A6PVC2 850 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PABPC1P11940 636 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CALB2P22676 271 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 VAMP1P23763 118 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FASP25445 335 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CSKP41240 450 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CAMKMTQ7Z624 323 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 EID2Q8N6I1 236 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SPATA22Q8NHS9 363 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF570Q96NI8 536 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 APOL4Q9BPW4 351 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 C12orf49Q9H741 205 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CHODLQ9H9P2 273 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RNF186Q9NXI6 227 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MAPRE3Q9UPY8 281 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RUVBL1Q9Y265 456 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ANO9A1A5B4 782 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FAM166BA8MTA8 275 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PDE2AO00408 941 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MAGEB2O15479 319 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 BCKDHAP12694 445 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 STK19P49842 368 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 DGKQP52824 942 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TAS2R39P59534 338 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF484Q5JVG2 852 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 WASHC2DQ5SRD0 308 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF540Q8NDQ6 660 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RAPGEFL1Q9UHV5 662 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SNX7Q9UNH6 387 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MRPS33Q9Y291 106 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MYRFQ9Y2G1 1151 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FBP2O00757 339 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SLC31A2O15432 143 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RPP38P78345 283 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CREMQ03060 361 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FAM83HQ6ZRV2 1179 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TPRA1Q86W33 373 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM132CQ8N3T6 1108 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 THEM6Q8WUY1 208 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 OR8D1Q8WZ84 308 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF566Q969W8 418 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 COMMD3Q9UBI1 195 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 COMMD3-BMI1R4GMX3 469 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RIIAD1A6NNX1 92 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SLC30A4O14863 429 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 DCXO43602 365 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 APOC1P02654 83 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 HTN3P15516 51 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 GLRA2P23416 452 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TUFMP49411 452 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 KCNQ1P51787 676 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 LAPTM5Q13571 262 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 HKDC1Q2TB90 917 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PAGE2BQ5JRK9 111 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 UGT3A1Q6NUS8 523 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 C3P1Q6ZMU1 363 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 C12orf66Q96MD2 445 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 EPB41L4BQ9H329 900 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FKBP14Q9NWM8 211 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PDE10AQ9Y233 779 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FXYD6-FXYD2A0A087WZ82 144 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SDR42E2A6NKP2 422 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 METTL18O95568 372 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PGRP06401 933 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FAM228BP0C875 321 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 GOT1P17174 413 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 OXTRP30559 389 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CDH12P55289 794 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM164Q5U3C3 297 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM214Q6NUQ4 689 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SMARCD1Q96GM5 515 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 LIN37Q96GY3 246 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TUBGCP5Q96RT8 1024 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FXYD6Q9H0Q3 95 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ENOPH1Q9UHY7 261 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PCTPQ9UKL6 214 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF490Q9ULM2 529 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PCDHGC3Q9UN70 934 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms