RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 PIK3CGP48736 1102 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 MEF2AQ02078 507 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 SH2D4BQ5SQS7 431 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 VWA5B1Q5TIE3 1220 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 FRMPD2BQ6IN97 320 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 TAX1BP1Q86VP1 789 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 D2HGDHQ8N465 521 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 ANKS4BQ8N8V4 417 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 OR4D9Q8NGE8 314 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 ZNF473Q8WTR7 871 aaKnown RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 TWIST2Q8WVJ9 160 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 MED8Q96G25 268 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 TRIM54Q9BYV2 358 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 MID1IP1Q9NPA3 183 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 TMEM9BQ9NQ34 198 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 DMRT3Q9NQL9 472 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 WASF3Q9UPY6 502 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 MUC6Q6W4X9 2439 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 ISM1B1AKI9 464 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 AZIN1O14977 448 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 SCELO95171 688 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 FAM107AO95990 144 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 HGFP14210 728 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 EZRP15311 586 aaKnown RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 HOXB9P17482 250 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CKMT2P17540 419 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 GNAZP19086 355 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 HNRNPH1P31943 449 aaKnown RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 C21orf58P58505 322 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 INSM1Q01101 510 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CHIT1Q13231 466 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 PRTGQ2VWP7 1150 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 FAM91A1Q658Y4 838 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CLYBLQ8N0X4 340 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CACTIN-AS1Q8N1I8 211 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 LRRC8CQ8TDW0 803 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 CHTF18Q8WVB6 975 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 SKA2Q8WVK7 121 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 ZUFSPQ96AP4 578 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 OR52B2Q96RD2 323 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 EGFL8Q99944 293 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 MS4A8Q9BY19 250 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.47□□□□□ -1.37
LINC00517-202ENST00000554257 SHCBP1LQ9BZQ2 653 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 LRRN3Q9H3W5 708 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 GMEB2Q9UKD1 530 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 KLHL20Q9Y2M5 609 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 TIMM22Q9Y584 194 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 GON4LQ3T8J9 2241 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 SCN2AQ99250 2005 aa6.47□□□□□ -1.37
LINC00517-202ENST00000554257 FEZF1A0PJY2 475 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 TLCD2A6NGC4 264 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 PIP5K1BO14986 540 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 HYAL3O43820 417 aaPredicted RBP6.46□□□□□ -1.37
LINC00517-202ENST00000554257 HRH2P25021 359 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 SERPINB3P29508 390 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 HNF4AP41235 474 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 PIK3CBP42338 1070 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 ASPHQ12797 758 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 PRSS53Q2L4Q9 553 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 STPG1Q5TH74 334 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 C6orf89Q6UWU4 347 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 SLCO6A1Q86UG4 719 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 SYTL1Q8IYJ3 562 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 CCNYL1Q8N7R7 359 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 C19orf47Q8N9M1 422 aaKnown RBP6.46□□□□□ -1.37
LINC00517-202ENST00000554257 ACTRT2Q8TDY3 377 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 SH3KBP1Q96B97 665 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 CNDP2Q96KP4 475 aaKnown RBP6.46□□□□□ -1.37
LINC00517-202ENST00000554257 C10orf90Q96M02 699 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 FCRL4Q96PJ5 515 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 CD180Q99467 661 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 MAP3K3Q99759 626 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 GTPBP2Q9BX10 602 aaKnown RBP6.46□□□□□ -1.37
LINC00517-202ENST00000554257 C1GALT1Q9NS00 363 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 UNC13CQ8NB66 2214 aa6.46□□□□□ -1.37
LINC00517-202ENST00000554257 LOC105369274A0A096LPK9 316 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 LOC102723532A0A0G2JNH3 316 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 D6RAR5 112 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 H7BY64 318 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 CAPN5O15484 640 aaPredicted RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 KATNA1O75449 491 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 ONECUT2O95948 504 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 S100BP04271 92 aaPredicted RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 PVRP15151 417 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 AHRP35869 848 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 CCNG1P51959 295 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 CSTF3Q12996 717 aaKnown RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 SLBPQ14493 270 aaKnown RBP eCLIP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 ZRSR2Q15696 482 aaKnown RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 SMU1Q2TAY7 513 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 ZNF385CQ66K41 422 aaPredicted RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 TMEM71Q6P5X7 295 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 FAM47EQ6ZV65 393 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 EFL1Q7Z2Z2 1120 aaKnown RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 OOSP2Q86WS3 158 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 OR4N4Q8N0Y3 316 aa6.46□□□□□ -1.38
LINC00517-202ENST00000554257 CPSF7Q8N684 471 aaKnown RBP6.46□□□□□ -1.38
LINC00517-202ENST00000554257 CCDC63Q8NA47 563 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms