RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 KRT6CP48668 564 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 AQP5P55064 265 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 BTKQ06187 659 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 LAPTM5Q13571 262 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 COL9A2Q14055 689 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-206ENST00000553830 DEFB110Q30KQ9 67 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 GGTA1PQ4G0N0 100 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 FCRL6Q6DN72 434 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 DBX2Q6ZNG2 339 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 MAVSQ7Z434 540 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 PLXDC1Q8IUK5 500 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRKCH-206ENST00000553830 ABHD11Q8NFV4 315 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 FCRL4Q96PJ5 515 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 MTERF1Q99551 399 aaKnown RBP13.55□□□□□ -0.24
PRKCH-206ENST00000553830 SLC29A3Q9BZD2 475 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 EPB41L1Q9H4G0 881 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 TMEM184CQ9NVA4 438 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 HAO1Q9UJM8 370 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 ZNF490Q9ULM2 529 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-206ENST00000553830 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 DNAJC15Q9Y5T4 150 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 SCN3AQ9NY46 2000 aa13.55□□□□□ -0.24
PRKCH-206ENST00000553830 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 A0A1W2PQM1 296 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 TLCD2A6NGC4 264 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 UGDHO60701 494 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 CXCR2P25025 360 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 BCL6P41182 706 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
PRKCH-206ENST00000553830 ARL4DP49703 201 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 ABRAXAS2Q15018 415 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 TBCCQ15814 346 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 ZIC1Q15915 447 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 FRG2Q64ET8 278 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 NXNQ6DKJ4 435 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 TMIGD1Q6UXZ0 262 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 PAQR7Q86WK9 346 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 KIAA2013Q8IYS2 634 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
PRKCH-206ENST00000553830 OR7G3Q8NG95 312 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 WDR34Q96EX3 536 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 FAR2Q96K12 515 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 MAGEB10Q96LZ2 347 aaPredicted RBP13.54□□□□□ -0.24
PRKCH-206ENST00000553830 TRAPPC9Q96Q05 1148 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 FRG2BQ96QU4 278 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 GFM1Q96RP9 751 aaKnown RBP13.54□□□□□ -0.24
PRKCH-206ENST00000553830 CCT8L2Q96SF2 557 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 GIMAP2Q9UG22 337 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 VPS13AQ96RL7 3174 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 SPTBP11277 2137 aa13.54□□□□□ -0.24
PRKCH-206ENST00000553830 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 ATP6AP2A0A1C7CYW4 349 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 HDAC3O15379 428 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 LCMT2O60294 686 aaKnown RBP13.53□□□□□ -0.24
PRKCH-206ENST00000553830 ULK1O75385 1050 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 ATP6AP2O75787 350 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 FGF4P08620 206 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 ACP1P24666 158 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 CASP2P42575 452 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 ACADVLP49748 655 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 IMPG1Q17R60 797 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 KIF26BQ2KJY2 2108 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 UGT3A2Q3SY77 523 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 SLC9B1Q4ZJI4 515 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 ZNF425Q6IV72 752 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 TMPRSS9Q7Z410 1059 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 SPATA21Q7Z572 469 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 TBC1D19Q8N5T2 526 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 BAHD1Q8TBE0 780 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-206ENST00000553830 UBE2E3Q969T4 207 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 REPS1Q96D71 796 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 C19orf60Q96EN9 201 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 MACROD1Q9BQ69 325 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 TWSG1Q9GZX9 223 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 WDR55Q9H6Y2 383 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-206ENST00000553830 IRAK4Q9NWZ3 460 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 VTI1BQ9UEU0 232 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 G3BP2Q9UN86 482 aaKnown RBP13.53□□□□□ -0.24
PRKCH-206ENST00000553830 PCDHGA11Q9Y5H2 935 aa13.53□□□□□ -0.24
PRKCH-206ENST00000553830 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.24
PRKCH-206ENST00000553830 TRBC2A0A5B9 178 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 OR2A25A4D2G3 310 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 ANKDD1BA6NHY2 528 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 TRPC5OSA6NMA1 111 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 SLCO1B7G3V0H7 640 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 H0YIV9 168 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 SAP18O00422 153 aaKnown RBP13.52□□□□□ -0.25
PRKCH-206ENST00000553830 TNFSF14O43557 240 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 FOXD2O60548 495 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-206ENST00000553830 CTSVO60911 334 aa13.52□□□□□ -0.25
PRKCH-206ENST00000553830 CBFA2T3O75081 653 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms