RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 KCNK10P57789 538 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 ARF3P61204 181 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 SARNPP82979 210 aaKnown RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 ACVR1Q04771 509 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF33BQ06732 778 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 GRB7Q14451 532 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 OASLQ15646 514 aaKnown RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 NDUFA9Q16795 377 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MINDY4Q4G0A6 757 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 CCSMST1Q4G0I0 132 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MTFR2Q6P444 385 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 SUSD1Q6UWL2 747 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 IGFL2Q6UWQ7 119 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 TMEM207Q6UWW9 146 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 SLC13A5Q86YT5 568 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 OR4N4Q8N0Y3 316 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 OR9A1PQ8NGU1 263 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MCOLN3Q8TDD5 553 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 C10orf90Q96M02 699 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MENTQ9BUN1 341 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 DRC3Q9H069 523 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MKKSQ9NPJ1 570 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 EIF2B3Q9NR50 452 aaKnown RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 ABI3Q9P2A4 366 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 VTI1BQ9UEU0 232 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 C19orf25Q9UFG5 118 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 TAC3Q9UHF0 121 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 PCYOX1Q9UHG3 505 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MKL2Q9ULH7 1088 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 GUCA1BQ9UMX6 200 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 ENTPD4Q9Y227 616 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 DRG1Q9Y295 367 aaKnown RBP9.43□□□□□ -0.9
ACTN1-208ENST00000553370 CAPN6Q9Y6Q1 641 aa9.43□□□□□ -0.9
ACTN1-208ENST00000553370 MED13LQ71F56 2210 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 A0A0A6YYC8 382 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 GOLGA8KD6RF30 607 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 GOLGA8TH3BQL2 631 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 I3L1I5 382 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 PCDH17O14917 1159 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 NRP2O60462 931 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 UNC5CO95185 931 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 RASAL1O95294 804 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 BMP10O95393 424 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ONECUT2O95948 504 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ESR1P03372 595 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ZSCAN5DPP0CG00 497 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 C8orf89P0DMQ9 161 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 COX6A1P12074 109 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 EZRP15311 586 aaKnown RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 NMBRP28336 390 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ATP5DP30049 168 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 HSD17B2P37059 387 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 NPY2RP49146 381 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 TNFSF10P50591 281 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 Q0VFX4 171 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 FASTKQ14296 549 aaKnown RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 RPS6KA1Q15418 735 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 HKDC1Q2TB90 917 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ICE2Q659A1 982 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 HIBCHQ6NVY1 386 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 RIPOR1Q6ZS17 1223 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 NEK10Q6ZWH5 1172 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF295-AS1Q8N0V1 137 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 OR2A1Q8NGT9 310 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 HMGCLL1Q8TB92 370 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 MAIP1Q8WWC4 291 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 NR4A3Q92570 626 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 MVB12AQ96EY5 273 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 MAGED4Q96JG8 741 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 ZNF285Q96NJ3 590 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 BARD1Q99728 777 aaKnown RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 EBNA1BP2Q99848 306 aaKnown RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 SLX1AQ9BQ83 275 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 PLCD4Q9BRC7 762 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 P2RY12Q9H244 342 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 SYBUQ9NX95 663 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 SEC14L3Q9UDX4 400 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 RUVBL1Q9Y265 456 aaKnown RBP9.42□□□□□ -0.9
ACTN1-208ENST00000553370 CRYL1Q9Y2S2 319 aa9.42□□□□□ -0.9
ACTN1-208ENST00000553370 NCOA6Q14686 2063 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 IGHV1-45A0A0A0MS14 117 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 OR2A25A4D2G3 310 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 A8MUI8 341 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 ARHGEF33A8MVX0 844 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 FAM227AF5H4B4 570 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 CCL21O00585 134 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 MLYCDO95822 493 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 SNRPB2P08579 225 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 STSP08842 583 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 ICAM2P13598 275 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 COX6B1P14854 86 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 ELAVL4P26378 380 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 RPL22P35268 128 aaKnown RBP9.41□□□□□ -0.9
ACTN1-208ENST00000553370 VPS41P49754 854 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 PNLIPRP1P54315 467 aa9.41□□□□□ -0.9
ACTN1-208ENST00000553370 RELBQ01201 579 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms