RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TLE3Q04726 772 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 CLN3Q13286 438 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 BMPR2Q13873 1038 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 FASTKQ14296 549 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 KCNAB1Q14722 419 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 EFTUD2Q15029 972 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 WASHC2DQ5SRD0 308 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 ATG9BQ674R7 924 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 FCRL6Q6DN72 434 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 ABHD13Q7L211 337 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 CMC1Q7Z7K0 106 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 SYVN1Q86TM6 617 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 TRIM73Q86UV7 250 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 DSELQ8IZU8 1212 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 C2orf73Q8N5S3 287 aaPredicted RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 CSNK1A1LQ8N752 337 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 LSM14AQ8ND56 463 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 OR1L3Q8NH93 324 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 RDH11Q8TC12 318 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 THAP4Q8WY91 577 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 MR1Q95460 341 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 NXNL1Q96CM4 212 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 PTCD3Q96EY7 689 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 PRAP1Q96NZ9 151 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 RUFY1Q96T51 708 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 ROGDIQ9GZN7 287 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 WDR54Q9H977 334 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 IGSF5Q9NSI5 407 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 FOXJ2Q9P0K8 574 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 IFT80Q9P2H3 777 aaPredicted RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 SLC22A14Q9Y267 594 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 SLC22A7Q9Y694 548 aa9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 MAP1BP46821 2468 aaKnown RBP9.83□□□□□ -0.84
TRAFD1-208ENST00000552890 A0A0J9YVX5 310 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 HYKKA2RU49 373 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ANKDD1BA6NHY2 528 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 H0YIG0 161 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 MAP2K7O14733 419 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 TLX3O43711 291 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 PIAS1O75925 651 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ONECUT2O95948 504 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 C1GALT1C1LP0DN25 315 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 CDH1P12830 882 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 TCN2P20062 427 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ALAS2P22557 587 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ARFIP1P53367 373 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 VSX2P58304 361 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 IRF8Q02556 426 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 OCA2Q04671 838 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ZNF460Q14592 562 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 NAA30Q147X3 362 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 PCBP2Q15366 365 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 NKAIN1Q4KMZ8 207 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 LIPJQ5W064 366 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 NXPE4Q6UWF7 544 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 TMIGD1Q6UXZ0 262 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ZNF517Q6ZMY9 492 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ZFAND4Q86XD8 727 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 RAB43Q86YS6 212 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 KIRREL3Q8IZU9 778 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 CENPLQ8N0S6 344 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 SNX31Q8N9S9 440 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 MFSD9Q8NBP5 474 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 GALNT6Q8NCL4 622 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 UHMK1Q8TAS1 419 aaKnown RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 KCTD4Q8WVF5 259 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 HNRNPLLQ8WVV9 542 aaKnown RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 SLC13A3Q8WWT9 602 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 WBP1Q96G27 269 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 OR2A5Q96R48 311 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ATOH8Q96SQ7 321 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 APMAPQ9HDC9 416 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 FAM60AQ9NP50 221 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 CUTCQ9NTM9 273 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ABCF3Q9NUQ8 709 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 C14orf105Q9NVL8 296 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 WDR70Q9NW82 654 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 NMRK1Q9NWW6 199 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 CIDEBQ9UHD4 219 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 ZFP69BQ9UJL9 534 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 FARSAQ9Y285 508 aaKnown RBP9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
TRAFD1-208ENST00000552890 AKAP13Q12802 2813 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 HMX2A2RU54 273 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 NCF1BA6NI72 391 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 NCF1CA8MVU1 366 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 H0YGG7 62 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 K7ENP7 123 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 COPEO14579 308 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 CASC3O15234 703 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 OR1F1O43749 312 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 KLK8O60259 260 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 CCNT2O60583 730 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 MLYCDO95822 493 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 NTRK1P04629 796 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 EIF2S1P05198 315 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 SERPINA6P08185 405 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 F7P08709 466 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 MYBL2P10244 700 aa9.81□□□□□ -0.84
TRAFD1-208ENST00000552890 NCF1P14598 390 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms