RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 C9P02748 559 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 IFNA4P05014 189 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CDK1P06493 297 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ANXA6P08133 673 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 HBQ1P09105 142 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ACSM4P0C7M7 580 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC35E2BP0CK96 405 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ERVK-10P10266 1014 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CKMT1AP12532 417 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ARSAP15289 507 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MYL12AP19105 171 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 PSMA3P25788 255 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MGAT1P26572 445 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 PTBP1P26599 531 aaKnown RBP eCLIP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 PSMB9P28065 219 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SDC4P31431 198 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ADRA1BP35368 520 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SPAM1P38567 509 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CD96P40200 585 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MATKP42679 507 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MAGEA2P43356 314 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ATP5OP48047 213 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 NRIP1P48552 1158 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CLCN3P51790 818 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TKTL1P51854 596 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 OR4D2P58180 307 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 RNF4P78317 190 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 DHODHQ02127 395 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SCN1BQ07699 218 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MAP4K2Q12851 820 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 RCAN2Q14206 197 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF124Q15973 351 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 FSCN1Q16658 493 aaKnown RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MICBQ29980 383 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 KIF19Q2TAC6 998 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 OTUD3Q5T2D3 398 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MPP7Q5T2T1 576 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SAXO2Q658L1 398 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TRNP1Q6NT89 227 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC27A4Q6P1M0 643 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SHQ1Q6PI26 577 aaKnown RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 LAYNQ6UX15 382 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ALKAL1Q6UXT8 129 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF574Q6ZN55 896 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 GDPGP1Q6ZNW5 385 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TMPRSS9Q7Z410 1059 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SPRED2Q7Z698 418 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 NECAB2Q7Z6G3 386 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 STRA8Q7Z7C7 330 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CYP4Z1Q86W10 505 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 XYLT1Q86Y38 959 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 RASAL3Q86YV0 1011 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CCDC117Q8IWD4 279 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ZZZ3Q8IYH5 903 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 GPD1LQ8N335 351 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 FSTL5Q8N475 847 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CAMKK1Q8N5S9 505 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ARL6IP6Q8N6S5 226 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 KCTD6Q8NC69 237 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 LPCAT1Q8NF37 534 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 OR8H1Q8NGG4 311 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CDC26Q8NHZ8 85 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CYP2W1Q8TAV3 490 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CNIH3Q8TBE1 160 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SYTL5Q8TDW5 730 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 GANCQ8TET4 914 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CHTF18Q8WVB6 975 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TFAP2BQ92481 460 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MYDGFQ969H8 173 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 COQ8BQ96D53 544 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MISP3Q96FF7 219 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 HSPA12BQ96MM6 686 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 LINC00052Q96N35 136 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SPATA13Q96N96 652 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 QRFPRQ96P65 431 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 BBS4Q96RK4 519 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TBCBQ99426 244 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 RIT2Q99578 217 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MXRA8Q9BRK3 442 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SEC22CQ9BRL7 303 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF670Q9BS34 389 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CPEB1Q9BZB8 566 aaKnown RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 WDR11Q9BZH6 1224 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 GPR62Q9BZJ7 368 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 MIXL1Q9H2W2 232 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 RHOJQ9H4E5 214 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 GSTO2Q9H4Y5 243 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 C8orf33Q9H7E9 229 aaPredicted RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CASS4Q9NQ75 786 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 KCNH7Q9NS40 1196 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 TRMT13Q9NUP7 481 aaKnown RBP5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SETD4Q9NVD3 440 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ERVK13-1Q9NX77 482 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SCN3BQ9NY72 215 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SLCO1C1Q9NYB5 712 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 COQ3Q9NZJ6 369 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF224Q9NZL3 707 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CCDC167Q9P0B6 97 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 CTSFQ9UBX1 484 aa5.13□□□□□ -1.59
LSM3P2-201ENST00000551246 SRP68Q9UHB9 627 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms