RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CD22P20273 847 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 TNFRSF1BP20333 461 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 S1PR1P21453 382 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 HSD17B3P37058 310 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 LHX1P48742 406 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PCYT1AP49585 367 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 SNU13P55769 128 aaKnown RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ISL1P61371 349 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ST8SIA6P61647 398 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ACTN3Q08043 901 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 TEFQ10587 303 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 HLFQ16534 295 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ASPRV1Q53RT3 343 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PRR27Q6MZM9 219 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 TRNP1Q6NT89 227 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ZNF704Q6ZNC4 412 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PLEKHM3Q6ZWE6 761 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 DSG4Q86SJ6 1040 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 TMPRSS12Q86WS5 348 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PRIMA1Q86XR5 153 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 FOXP4Q8IVH2 680 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 CFAP206Q8IYR0 622 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ANKRD13CQ8N6S4 541 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PRR26Q8N8Z3 221 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 OR8H1Q8NGG4 311 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 SSMEM1Q8WWF3 244 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ABTB1Q969K4 478 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 TEKT1Q969V4 418 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ST6GALNAC6Q969X2 333 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 MIB2Q96AX9 1013 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 PHF21AQ96BD5 680 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 THOC1Q96FV9 657 aaKnown RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 OXNAD1Q96HP4 312 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 CDHR1Q96JP9 859 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 CDH20Q9HBT6 801 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 MID1IP1Q9NPA3 183 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 C1RLQ9NZP8 487 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 KLHL9Q9P2J3 617 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 KCNS2Q9ULS6 477 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 SPIN1Q9Y657 262 aaPredicted RBP5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ABCC12Q96J65 1359 aa5.04□□□□□ -1.6
CPSF6-206ENST00000550987 ADGRG4Q8IZF6 3080 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 PDS5AQ29RF7 1337 aaKnown RBP5.03□□□□□ -1.6
CPSF6-206ENST00000550987 CELSR1Q9NYQ6 3014 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 NEMP2A6NFY4 417 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 DVL1O14640 695 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 PPEF2O14830 753 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 HTATSF1O43719 755 aaKnown RBP5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ECE2O60344 883 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 KINO60870 393 aaKnown RBP5.03□□□□□ -1.6
CPSF6-206ENST00000550987 GLUD1P00367 558 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 PNPP00491 289 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 H1F0P07305 194 aaKnown RBP5.03□□□□□ -1.6
CPSF6-206ENST00000550987 CSF2RAP15509 400 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 TCF4P15884 667 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ITIH1P19827 911 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 MPZP25189 248 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 GLUD2P49448 558 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 UBASH3AP57075 661 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 EEF1A1P68104 462 aaKnown RBP5.03□□□□□ -1.6
CPSF6-206ENST00000550987 RPA4Q13156 261 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 CBX3Q13185 183 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 LY6DQ14210 128 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ETFDHQ16134 617 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 MDH1BQ5I0G3 518 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 EEF1A1P5Q5VTE0 462 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ARHGAP22Q7Z5H3 698 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 TMPRSS11BQ86T26 416 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 NRACQ8N912 160 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 UXS1Q8NBZ7 420 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 OR7G3Q8NG95 312 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 OCC1Q8TAD7 63 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 TMEM255BQ8WV15 326 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 UBLCP1Q8WVY7 318 aaPredicted RBP5.03□□□□□ -1.6
CPSF6-206ENST00000550987 AK8Q96MA6 479 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 SPRY4Q9C004 299 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 TMEM161AQ9NX61 479 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ELOVL5Q9NYP7 299 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 TXNDC16Q9P2K2 825 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 SIX4Q9UIU6 781 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 MYO6Q9UM54 1294 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ITM2BQ9Y287 266 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 ASXL3Q9C0F0 2248 aa5.03□□□□□ -1.6
CPSF6-206ENST00000550987 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 KIAA1217Q5T5P2 1943 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ARHGEF17Q96PE2 2063 aaPredicted RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 LY6G6EA0A0G2JKS1 128 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 GTPBP10A4D1E9 387 aaKnown RBP5.02□□□□□ -1.61
CPSF6-206ENST00000550987 WDR91A4D1P6 747 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 LILRA5A6NI73 299 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 MID1O15344 667 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 ZNHIT1O43257 154 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 KDM4BO94953 1096 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 TIMP1P01033 207 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 HOXC6P09630 235 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 SMIM18P0DKX4 95 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 SPP1P10451 314 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 MYOD1P15172 320 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 CTNNB1P35222 781 aa5.02□□□□□ -1.61
CPSF6-206ENST00000550987 MLLT10P55197 1068 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms