RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RC3H2Q9HBD1 1191 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 FAM120CQ9NX05 1096 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 KCTD3Q9Y597 815 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 METTL21EPA6NDL7 271 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 ANXA2P2A6NMY6 339 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 ANXA2P07355 339 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 GJA9P57773 515 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 RIPPLY1Q0D2K3 151 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 UNC50Q53HI1 259 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 C2orf73Q8N5S3 287 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 FAM110BQ8TC76 370 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 KCTD13Q8WZ19 329 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 BHLHE41Q9C0J9 482 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 DPP7Q9UHL4 492 aa15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 ZFP37Q9Y6Q3 630 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-212ENST00000550418 PIK3CBP42338 1070 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CRISP3P54108 245 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 NOL9Q5SY16 702 aaKnown RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 AGMOQ6ZNB7 445 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF767PQ75MW2 155 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SCAMP5Q8TAC9 235 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ZBED6CLQ96FA7 236 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SYT11Q9BT88 431 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 BCL2L14Q9BZR8 327 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 TP63Q9H3D4 680 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SIX4Q9UIU6 781 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ANKRD12Q6UB98 2062 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 TTC24A2A3L6 582 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SOX14O95416 240 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 GDF5P43026 501 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 PGGT1BP53609 377 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 GK3PQ14409 553 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 NCEH1Q6PIU2 408 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SNX20Q7Z614 316 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 TCEANCQ8N8B7 351 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 NSUN5Q96P11 429 aaKnown RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 HPF1Q9NWY4 346 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 PCDHGB6Q9Y5F9 930 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 G3V2L1 256 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 GRID2O43424 1007 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CRYZL1O95825 349 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 FLT3LGP49771 235 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 PRR5P85299 388 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 NPRL3Q12980 569 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CAMK1Q14012 370 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CBX2Q14781 532 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 DUSP28Q4G0W2 176 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 UBE2Q1Q7Z7E8 422 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF598Q86UK7 904 aaKnown RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CEP97Q8IW35 865 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 Q8N402 240 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SUSD6Q92537 303 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 NCSTNQ92542 709 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 DNASE1L2Q92874 299 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 FIZ1Q96SL8 496 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SORT1Q99523 831 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 IFT27Q9BW83 186 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 MYH7P12883 1935 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 PRSS51A0A1B0GVH4 220 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 UPK1BO75841 260 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 OR7A10O76100 309 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CNTN5O94779 1100 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF24P17028 368 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 GCAP28676 217 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 RYKP34925 604 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC10A2Q12908 348 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 BTG3Q14201 252 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 PTGR1Q14914 329 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 SHQ1Q6PI26 577 aaKnown RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 CHST4Q8NCG5 386 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF382Q96SR6 550 aa15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 NSUN3Q9H649 340 aaKnown RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-212ENST00000550418 TRAV19A0A0A6YYK7 116 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 SRPRAP08240 638 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 STSP08842 583 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PON2Q15165 354 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 CCDC107Q8WV48 283 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 RANBP9Q96S59 729 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 BEX1Q9HBH7 125 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 FNIP2Q9P278 1114 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ALS2Q96Q42 1657 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 A0A1W2PQ67 120 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PRKCGP05129 697 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 EBLN1P0CF75 366 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 DNASE1P24855 282 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 RAB2AP61019 212 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PPP3R1P63098 170 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 EIF5AP63241 154 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 KCNJ8Q15842 424 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 RANBP3LQ86VV4 465 aaPredicted RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 ZSWIM9Q86XI8 627 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 MFSD2AQ8NA29 543 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 SRFBP1Q8NEF9 429 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 TRIM2Q9C040 744 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 BRD7Q9NPI1 651 aa15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 PPIEQ9UNP9 301 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-212ENST00000550418 VILLO15195 856 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms