RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ANKRD49Q8WVL7 239 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 PTERQ96BW5 349 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 PYCR2Q96C36 320 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 CAB39LQ9H9S4 337 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 ZNF304Q9HCX3 659 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 CTNNAL1Q9UBT7 734 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 TLK1Q9UKI8 766 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 TP53TG5Q9Y2B4 290 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 OARD1Q9Y530 152 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 MAU2Q9Y6X3 613 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 TENM4Q6N022 2769 aa16.43■□□□□ 0.22
CHMP1A-208ENST00000550102 P2RX6O15547 441 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 PHGDHO43175 533 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 WISP3O95389 354 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 UMODP07911 640 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 PLA2G2AP14555 144 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 FBLP22087 321 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 GRK3P35626 688 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 OR1D4P47884 311 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 CSNK1G2P78368 415 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 SLMAPQ14BN4 828 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 EFTUD2Q15029 972 aaKnown RBP eCLIP16.42■□□□□ 0.228e-7■■■■■ 33.2
CHMP1A-208ENST00000550102 NKG7Q16617 165 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 GLE1Q53GS7 698 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 GRTP1Q5TC63 336 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 TCTN3Q6NUS6 607 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 COL26A1Q96A83 441 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 THAP11Q96EK4 314 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 EGFL8Q99944 293 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 DERL2Q9GZP9 239 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 DRC3Q9H069 523 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 TSPYL1Q9H0U9 437 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 ZNF71Q9NQZ8 489 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 G3BP2Q9UN86 482 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 CDC14AQ9UNH5 594 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 MYO18BQ8IUG5 2567 aa16.42■□□□□ 0.22
CHMP1A-208ENST00000550102 KCNE1BA0A087WTH5 132 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 PEX12O00623 359 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 SLC28A2O43868 658 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 IGHEP01854 428 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 ANXA5P08758 320 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 NPPBP16860 134 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 PHBP35232 272 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 HNMTP50135 292 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 CCR8P51685 355 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 PGDP52209 483 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 FOXL2P58012 376 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 RAB10P61026 200 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 DSG2Q14126 1118 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 ZKSCAN8Q15776 578 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 NDUFA9Q16795 377 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 ZXDCQ2QGD7 858 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 PPP1R32Q7Z5V6 425 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 ABHD11Q8NFV4 315 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 OR4K3Q96R72 315 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 FMO2Q99518 471 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 SPSB2Q99619 263 aa16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 ZNF282Q9UDV7 671 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 DMGDHQ9UI17 866 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-208ENST00000550102 DOCK10Q96BY6 2186 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 SCN3AQ9NY46 2000 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 CCDC166P0CW27 439 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 BCL6P41182 706 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 ATP6V0D1P61421 351 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 OCA2Q04671 838 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 VN1R4Q7Z5H5 301 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 ARHGEF39Q8N4T4 335 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 NACC2Q96BF6 587 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 FER1L6-AS2Q96M78 137 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 TSNARE1Q96NA8 513 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 SLC25A23Q9BV35 468 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 P4HTMQ9NXG6 502 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 DYRK1BQ9Y463 629 aa16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 PCDHGA9Q9Y5G4 932 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-208ENST00000550102 BSNQ9UPA5 3926 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 FEZF1A0PJY2 475 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 VSTM2BA6NLU5 285 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 FAM155BO75949 473 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 STATHP02808 62 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC35G6P0C7Q6 338 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 NR1D1P20393 614 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 MMP11P24347 488 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 CCL11P51671 97 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 FAM53BQ14153 422 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 ATG14Q6ZNE5 492 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 SHISA6Q6ZSJ9 500 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 ASB18Q6ZVZ8 466 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 PTRH1Q86Y79 214 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 CLEC1AQ8NC01 280 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 CAMKVQ8NCB2 501 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 STT3BQ8TCJ2 826 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC5A11Q8WWX8 675 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 IFT81Q8WYA0 676 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 NEIL2Q969S2 332 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 MIEF2Q96C03 454 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 MMABQ96EY8 250 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 CYTH2Q99418 400 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms