RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 NEK10Q6ZWH5 1172 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 CPEB2Q7Z5Q1 589 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 PCGF5Q86SE9 256 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ZC3H7AQ8IWR0 971 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 UBL4BQ8N7F7 174 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 MDS2Q8NDY4 140 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 SKA2Q8WVK7 121 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 METTL21AQ8WXB1 218 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 RERGQ96A58 199 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 GPR137Q96N19 417 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 TCF12Q99081 682 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 TREX2Q9BQ50 279 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ACAT2Q9BWD1 397 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 FRMD8P1Q9BZ68 369 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 DRC3Q9H069 523 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 GPAMQ9HCL2 828 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 MRPS30Q9NP92 439 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 TREX1Q9NSU2 369 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ITGB1BP2Q9UKP3 347 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 MEMO1Q9Y316 297 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 SETD2Q9BYW2 2564 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 KCNE1BA0A087WTH5 132 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 KRT87PA6NCN2 255 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 SOWAHDA6NJG2 315 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 A8MUI8 341 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 E7EVH7 732 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 H3BMM5 538 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 C19orf84I3L1E1 186 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 PSIP1O75475 530 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 CCNDBP1O95273 360 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 UQCRHP07919 91 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 RPA3P35244 121 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 CD96P40200 585 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 NPY2RP49146 381 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 ABATP80404 500 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 PMP22Q01453 160 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 NDUFA9Q16795 377 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 MEP1AQ16819 746 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 SYT16Q17RD7 645 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 ICE2Q659A1 982 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 SUSD1Q6UWL2 747 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 PEX26Q7Z412 305 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 AMER2Q8N7J2 671 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 FBXO15Q8NCQ5 510 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 PPHLN1Q8NEY8 458 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 M1APQ8TC57 530 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 PHF10Q8WUB8 498 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 SCMH1Q96GD3 660 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 PANX2Q96RD6 677 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 EBNA1BP2Q99848 306 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 VN1R1Q9GZP7 353 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 MCCC2Q9HCC0 563 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 RAB6BQ9NRW1 208 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 FAM114A2Q9NRY5 505 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 C19orf25Q9UFG5 118 aaPredicted RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 SH3BGRL2Q9UJC5 107 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 TINAGQ9UJW2 476 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 RUVBL2Q9Y230 463 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 REXO2Q9Y3B8 237 aaKnown RBP9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
TRAFD1-207ENST00000550051 A0A0U1RQJ8 604 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 ZNF839A8K0R7 811 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 ARHGEF33A8MVX0 844 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 E7ENX8 843 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 AP3B1O00203 1094 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 ASNA1O43681 348 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 LIASO43766 372 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 IPO7O95373 1038 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 ESR1P03372 595 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 APRTP07741 180 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 PTMSP20962 102 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 AVPR1BP47901 424 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 AGTR2P50052 363 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 PNLIPRP1P54315 467 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 KRTAP10-9P60411 292 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 ALDH6A1Q02252 535 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 TAP2Q03519 686 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 TUBA3CQ13748 450 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 PTK6Q13882 451 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 EXT1Q16394 746 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 BTBD16Q32M84 506 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 CTSL3PQ5NE16 218 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 TUBA3EQ6PEY2 450 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 SDCCAG8Q86SQ7 713 aaPredicted RBP9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 DOLPP1Q86YN1 238 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 SIAH3Q8IW03 269 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 SYCE1Q8N0S2 351 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 BEST3Q8N1M1 668 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 LPGAT1Q92604 370 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 HES6Q96HZ4 224 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 MAGED4Q96JG8 741 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 SIGLEC12Q96PQ1 595 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 PKP4Q99569 1192 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 UTP23Q9BRU9 249 aaKnown RBP9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 IL22Q9GZX6 179 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 MMP25Q9NPA2 562 aa9.3□□□□□ -0.92
TRAFD1-207ENST00000550051 KLHL42Q9P2K6 505 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms