RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 HPP00738 406 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 SLC26A3P40879 764 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 GLRBP48167 497 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 PGGT1BP53609 377 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 EMP2P54851 167 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 RELAQ04206 551 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 Q0VFX4 171 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 SP140Q13342 867 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 PDAP1Q13442 181 aaKnown RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 PHKG1Q16816 387 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 SYT16Q17RD7 645 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 TEDDM1Q5T9Z0 273 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 FAAH2Q6GMR7 532 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 TRMT10BQ6PF06 316 aaKnown RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 AGTRAPQ6RW13 159 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 Q6ZS92 163 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 SYDE1Q6ZW31 735 aaPredicted RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 CUZD1Q86UP6 607 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 ARHGEF39Q8N4T4 335 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 AMER3Q8N944 861 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 GPATCH11Q8N954 259 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 RUNDC3BQ96NL0 473 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 WDR77Q9BQA1 342 aaPredicted RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 WDR83Q9BRX9 315 aaKnown RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 PARVBQ9HBI1 364 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 PLAC1Q9HBJ0 212 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 TMEM184CQ9NVA4 438 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 ASF1BQ9NVP2 202 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 SH2B3Q9UQQ2 575 aa15.52■□□□□ 0.08
VPS29-207ENST00000549970 MRPS2Q9Y399 296 aaKnown RBP15.52■□□□□ 0.08
VPS29-207ENST00000549970 TTI1O43156 1089 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 HEXBP07686 556 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 HRH2P25021 359 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 ITGA8P53708 1063 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 RPS15AP62244 130 aaKnown RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 SNRPNP63162 240 aaKnown RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 MAT1AQ00266 395 aaKnown RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 EEF1A2Q05639 463 aaKnown RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 NAE1Q13564 534 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 FAM53BQ14153 422 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 NDUFA9Q16795 377 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 EIF2S3LQ2VIR3 472 aaKnown RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 HECTD2Q5U5R9 776 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 ATG9BQ674R7 924 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 HIBCHQ6NVY1 386 aaPredicted RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 PPP4R1Q8TF05 950 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 CNDP1Q96KN2 507 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 NAPGQ99747 312 aaPredicted RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 MACROD1Q9BQ69 325 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 TRIM31Q9BZY9 425 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 PCBD2Q9H0N5 130 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 MKKSQ9NPJ1 570 aaPredicted RBP15.51■□□□□ 0.07
VPS29-207ENST00000549970 C14orf105Q9NVL8 296 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 PCDHGA10Q9Y5H3 936 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 SAR1BQ9Y6B6 198 aa15.51■□□□□ 0.07
VPS29-207ENST00000549970 NSG1A0A0A6YYJ2 146 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 PABPN1LA6NDY0 278 aaKnown RBP15.5■□□□□ 0.07
VPS29-207ENST00000549970 SLC16A5O15375 505 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 HIST1H2AGP0C0S8 130 aaPredicted RBP15.5■□□□□ 0.07
VPS29-207ENST00000549970 COX6A1P12074 109 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 HIST1H2ADP20671 130 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 CXCR2P25025 360 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 AVPR1BP47901 424 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 IL2P60568 153 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 CSNK1G2P78368 415 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 NR6A1Q15406 480 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 LINC00696Q6ZRV3 163 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 VN1R4Q7Z5H5 301 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 GALNT7Q86SF2 657 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 C17orf64Q86WR6 236 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 OR9A4Q8NGU2 314 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 DNAJB14Q8TBM8 379 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 ANP32BQ92688 251 aaKnown RBP15.5■□□□□ 0.07
VPS29-207ENST00000549970 HIST1H2AHQ96KK5 128 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 HIST1H2AJQ99878 128 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 H2AFJQ9BTM1 129 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 EPS8L2Q9H6S3 715 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 LRRC4CQ9HCJ2 640 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 NOVA2Q9UNW9 492 aaKnown RBP15.5■□□□□ 0.07
VPS29-207ENST00000549970 COPG1Q9Y678 874 aaKnown RBP15.5■□□□□ 0.07
VPS29-207ENST00000549970 TEX264Q9Y6I9 313 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 NBPF19A0A087WUL8 3843 aa15.5■□□□□ 0.07
VPS29-207ENST00000549970 FEZF1A0PJY2 475 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 SEMA7AO75326 666 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 SEC31AO94979 1220 aaKnown RBP15.49■□□□□ 0.07
VPS29-207ENST00000549970 TSPAN12O95859 305 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 CDH1P12830 882 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 FDXRP22570 491 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 PAFAH1B1P43034 410 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 ARL4CP56559 192 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 STEAP4Q687X5 459 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 FAM45BPQ6NSW5 357 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 LCTLQ6UWM7 567 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 IGFL2Q6UWQ7 119 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 NDUFAF7Q7L592 441 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 PRSS41Q7RTY9 318 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 ANKMY2Q8IV38 441 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 ZC3H7AQ8IWR0 971 aaKnown RBP15.49■□□□□ 0.07
VPS29-207ENST00000549970 KBTBD2Q8IY47 623 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 PRR7Q8TB68 274 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms