RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 FAM124AQ86V42 546 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 CYP4Z2PQ8N1L4 340 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 RAET1EQ8TD07 263 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 APOLD1Q96LR9 279 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 SLC29A3Q9BZD2 475 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 GPR63Q9BZJ6 419 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 LATS2Q9NRM7 1088 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 SPASTQ9UBP0 616 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 PCDHB5Q9Y5E4 795 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 FAM172BPA6NC97 362 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 GOLGA8CPA6NN73 597 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 UPK3BL1B0FP48 263 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 UPK3BL2E5RIL1 263 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 FPGTO14772 594 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 STK16O75716 305 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF7P17097 686 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 DGKAP23743 735 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 RRM2P31350 389 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 GGT2P36268 569 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 KIR3DL1P43629 444 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 IDH2P48735 452 aaKnown RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 RGS6P49758 472 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 LIMK1P53667 647 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 CRYBA2P53672 197 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 ARPP19P56211 112 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 ZXDBP98169 803 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 BCL7AQ4VC05 210 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF621Q6ZSS3 439 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 C7orf34Q96L11 122 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 FKBP14Q9NWM8 211 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-228ENST00000548938 PCDHB9Q9Y5E1 797 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 SNX8Q9Y5X2 465 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
HDAC7-228ENST00000548938 H3BQ06 376 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-228ENST00000548938 GFRA2O00451 464 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-228ENST00000548938 CTDSP2O14595 271 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
HDAC7-228ENST00000548938 OAZ2O95190 189 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 NUDT7P0C024 238 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 PRPS2P11908 318 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 AQP1P29972 269 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 RACK1P63244 317 aaKnown RBP13.28□□□□□ -0.28
HDAC7-228ENST00000548938 DSC3Q14574 896 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 LRRC26Q2I0M4 334 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 CCDC190Q86UF4 302 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 ZSWIM9Q86XI8 627 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 PGBD3Q8N328 593 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 RNF175Q8N4F7 328 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 ZBTB2Q8N680 514 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 FEVQ99581 238 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 KCNS3Q9BQ31 491 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 ROGDIQ9GZN7 287 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 ELOVL6Q9H5J4 265 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 MKLN1Q9UL63 735 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 TBC1D24Q9ULP9 559 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 WBP11Q9Y2W2 641 aaKnown RBP13.28□□□□□ -0.28
HDAC7-228ENST00000548938 LYVE1Q9Y5Y7 322 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 ACSL4O60488 711 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 EPN2O95208 641 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 RHOCP08134 193 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 SLC15A1P46059 708 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 CAMK2BQ13554 666 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 DUOXA1Q1HG43 343 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF544Q6NX49 715 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 UBQLNLQ8IYU4 475 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 CLECL1Q8IZS7 167 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 STX19Q8N4C7 294 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 DMRTB1Q96MA1 342 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 EPYCQ99645 322 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 CRISPLD1Q9H336 500 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 CCDC177Q9NQR7 707 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-228ENST00000548938 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 BOLA1Q9Y3E2 137 aa13.28□□□□□ -0.28
HDAC7-228ENST00000548938 KIAA0513O60268 411 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 CPSF4O95639 269 aaKnown RBP13.27□□□□□ -0.28
HDAC7-228ENST00000548938 GPX2P18283 190 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 ETV6P41212 452 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 CDH4P55283 916 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 MRPS15P82914 257 aaKnown RBP13.27□□□□□ -0.28
HDAC7-228ENST00000548938 C5orf22Q49AR2 442 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 TMC5Q6UXY8 1006 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 CERS6Q6ZMG9 384 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 NRARPQ7Z6K4 114 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 ZNF598Q86UK7 904 aaKnown RBP13.27□□□□□ -0.28
HDAC7-228ENST00000548938 COL21A1Q96P44 957 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 NEDD4LQ96PU5 975 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 HHIPQ96QV1 700 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 SEPT5Q99719 369 aaPredicted RBP13.27□□□□□ -0.28
HDAC7-228ENST00000548938 RLIMQ9NVW2 624 aa13.27□□□□□ -0.28
HDAC7-228ENST00000548938 MAGEB17A8MXT2 336 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms