RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 BCAS1O75363 584 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 MT-ND2P03891 347 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 ALPPL2P10696 532 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 OPRL1P41146 370 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 SPIBQ01892 262 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 MESP2Q0VG99 397 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 CNTN1Q12860 1018 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 KIAA0040Q15053 153 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 CYP2A13Q16696 494 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 TNFAIP8L2Q6P589 184 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 FAM20CQ8IXL6 584 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 ZCCHC7Q8N3Z6 543 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 HUS1BQ8NHY5 278 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 NEIL2Q969S2 332 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 PDLIM5Q96HC4 596 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 NTMT1Q9BV86 223 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 SERHLQ9NQF3 203 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 ERVK-11Q9UQG0 969 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 CCDC88CQ9P219 2028 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 A0A096LPI6 279 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 DYTNA2CJ06 578 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 FADS2P1A8MWK0 482 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 FAM227AF5H4B4 570 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 J3KTA2 159 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 C6orf47O95873 294 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 CATP04040 527 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 KLK1P06870 262 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 AMD1P17707 334 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 MAPK1P28482 360 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 C21orf33P30042 268 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 KDELR2P33947 212 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 SOWAHCQ53LP3 525 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 TCEAL5Q5H9L2 206 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 OLIG3Q7RTU3 272 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 PAGE2Q7Z2X7 111 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 OR2A12Q8NGT7 310 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 PSMA8Q8TAA3 256 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 FIBINQ8TAL6 211 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 FNDC8Q8TC99 324 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 KCNH6Q9H252 994 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 EXOSC4Q9NPD3 245 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 ASF1AQ9Y294 204 aa13.21□□□□□ -0.29
PRPF40B-209ENST00000548825 GABRR3A8MPY1 467 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 PITPNM1O00562 1244 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF197O14709 1029 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 ITGB8P26012 769 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 VIPR2P41587 438 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 MAPK8P45983 427 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 DAPP51397 102 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 PRKAG1P54619 331 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 POLR2LP62875 67 aaKnown RBP13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 EMX1Q04741 257 aaPredicted RBP13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 C2orf80Q0P641 193 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 CDK5R2Q13319 367 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 AQP6Q13520 282 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 TAGAPQ8N103 731 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 VPS37AQ8NEZ2 397 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 OVCA2Q8WZ82 227 aa13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 CLP1Q92989 425 aaKnown RBP13.21□□□□□ -0.3
PRPF40B-209ENST00000548825 SUV39H1O43463 412 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 MMP20O60882 483 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SOCS5O75159 536 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC19A1P41440 591 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 TMEM115Q12893 351 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 VMACQ2NL98 169 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 COX20Q5RI15 118 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 ZSWIM3Q96MP5 696 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 MACROD1Q9BQ69 325 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SLC12A9Q9BXP2 914 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 EMILIN2Q9BXX0 1053 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 PSME2Q9UL46 239 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SAMD4AQ9UPU9 718 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 NEUROG3Q9Y4Z2 214 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 FKTNO75072 461 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 NME6O75414 186 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 HTR1AP08908 422 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 CSNK1DP48730 415 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 ERVFC1P60507 584 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 PFN3P60673 137 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 PPP2R2BQ00005 443 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 CD300CQ08708 224 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SKIV2LQ15477 1246 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 XAF1Q6GPH4 301 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 TRIM46Q7Z4K8 759 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 SFTPA1Q8IWL2 248 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 HEPHQ9BQS7 1158 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 MIEF1Q9NQG6 463 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
PRPF40B-209ENST00000548825 TAS2R16Q9NYV7 291 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms