RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MFSD3Q96ES6 412 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 IMMP1LQ96LU5 166 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 OR2A5Q96R48 311 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 TUBB6Q9BUF5 446 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 TSGA10Q9BZW7 698 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 DRC3Q9H069 523 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 KCNK13Q9HB14 408 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 ENAMQ9NRM1 1142 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 C14orf105Q9NVL8 296 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 NPIPA1Q9UND3 350 aa11.32□□□□□ -0.6
TRAFD1-205ENST00000548277 LOC102723996A0A087X1L8 192 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 TTI1O43156 1089 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 MATN4O95460 622 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 RPS3P23396 243 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 KIR3DL1P43629 444 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 PNLIPRP1P54315 467 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 KRTAP10-9P60411 292 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 PRDX1Q06830 199 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 LONRF1Q17RB8 773 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 ICE2Q659A1 982 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 SPINK14Q6IE38 97 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 XKRXQ6PP77 449 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 TMEM205Q6UW68 189 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 PRSS41Q7RTY9 318 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 CPEB2Q7Z5Q1 589 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF295-AS1Q8N0V1 137 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 CYTH2Q99418 400 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 FRMD8P1Q9BZ68 369 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 TRIM8Q9BZR9 551 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 VN1R1Q9GZP7 353 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 TREX1Q9NSU2 369 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 HCN3Q9P1Z3 774 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 TEKT2Q9UIF3 430 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 KLK4Q9Y5K2 254 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 HCFC1P51610 2035 aa11.31□□□□□ -0.6
TRAFD1-205ENST00000548277 CSMD2Q7Z408 3487 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 E5RI56 91 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 H7BY64 318 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 MAN1A2O60476 641 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 PKMP14618 531 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 IL1RNP18510 177 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 PTGER4P35408 488 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 CD96P40200 585 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 AVPR1BP47901 424 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 SMSP52788 366 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 HSF1Q00613 529 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 OC90Q02509 493 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 CUL1Q13616 776 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 NAA25Q14CX7 972 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 NDUFA9Q16795 377 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 MEI1Q5TIA1 1274 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 GARNL3Q5VVW2 1013 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 MTFR2Q6P444 385 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 RPTNQ6XPR3 784 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 C3P1Q6ZMU1 363 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 LRRC6Q86X45 466 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 CRLF3Q8IUI8 442 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 ZCCHC10Q8TBK6 192 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 ADAMTS18Q8TE60 1221 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 MVB12AQ96EY5 273 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 MAGED4Q96JG8 741 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF354BQ96LW1 612 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 PRAP1Q96NZ9 151 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 SLC30A3Q99726 388 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 RBCK1Q9BYM8 510 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 SYBUQ9NX95 663 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 UTP6Q9NYH9 597 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 BFARQ9NZS9 450 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 PAK5Q9P286 719 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 APCP25054 2843 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 INTS1Q8N201 2190 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
TRAFD1-205ENST00000548277 SGK494L7N484 410 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 SMAPO00193 183 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 PSIP1O75475 530 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 CDC123O75794 336 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 CLDN14O95500 239 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 SLC16A8O95907 504 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 CATP04040 527 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ARNTP27540 789 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 NPY2RP49146 381 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 EMP3P54852 163 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 AP2B1P63010 937 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ACTN3Q08043 901 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 TUBA3CQ13748 450 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 OR1C1Q15619 314 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ACER2Q5QJU3 275 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF425Q6IV72 752 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 MRNIPQ6NTE8 343 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 TUBA3EQ6PEY2 450 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 GSTA5Q7RTV2 222 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms