RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CUEDC1Q9NWM3 386 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 PPIL1Q9Y3C6 166 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 GABRR3A8MPY1 467 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 DENRO43583 198 aaKnown RBP12.28□□□□□ -0.44
SCAF11-209ENST00000547018 EPN2O95208 641 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 C1orf105O95561 183 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 CLDN8P56748 225 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 TAS2R50P59544 299 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 ZNF852Q6ZMS4 543 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 MICU2Q8IYU8 434 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 ZFP28Q8NHY6 868 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 OTUB2Q96DC9 234 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 FERD3LQ96RJ6 166 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 MYADMQ96S97 322 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 DUSP26Q9BV47 211 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 CD93Q9NPY3 652 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 STON1Q9Y6Q2 735 aa12.28□□□□□ -0.44
SCAF11-209ENST00000547018 PTPRSQ13332 1948 aa12.27□□□□□ -0.44
SCAF11-209ENST00000547018 RPL5P46777 297 aaKnown RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 PRLHRP49683 370 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 CLDN2P57739 230 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 PPP4R4Q6NUP7 873 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 KIAA1211LQ6NV74 962 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 MED27Q6P2C8 311 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ZC3H7AQ8IWR0 971 aaKnown RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 SMYD1Q8NB12 490 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 CMTM7Q96FZ5 175 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 PPP1R16AQ96I34 528 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF597Q96LX8 424 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 BARD1Q99728 777 aaKnown RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 RIBC2Q9H4K1 309 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 FBXL12Q9NXK8 326 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 SMPD3Q9NY59 655 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 TCRBV5S2A0A599 114 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 C1QTNF3-AMACRE9PGA6 284 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 SOD1P00441 154 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 BMP2P12643 396 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 GGT1P19440 569 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 HTR1EP28566 365 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 HSPA13P48723 471 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ELP6Q0PNE2 266 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 NHSL2Q5HYW2 709 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF551Q7Z340 670 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 CLVS1Q8IUQ0 354 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 CHERPQ8IWX8 916 aaKnown RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF548Q8NEK5 533 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 OR4A15Q8NGL6 344 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 F2RL3Q96RI0 385 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 SLC2A11Q9BYW1 496 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 SLC29A3Q9BZD2 475 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 MKRN2Q9H000 416 aaKnown RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 PAIP1Q9H074 479 aaKnown RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ABCG4Q9H172 646 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 OLAHQ9NV23 265 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.45
SCAF11-209ENST00000547018 ARHGEF17Q96PE2 2063 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-209ENST00000547018 SLC5A10A0PJK1 596 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 AGRPO00253 132 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 H6PDO95479 791 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ASLP04424 464 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 NPPBP16860 134 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PTPN5P54829 565 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 SGCGQ13326 291 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 WSCD2Q2TBF2 565 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 OLIG3Q7RTU3 272 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PROSER1Q86XN7 944 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ETFBKMTQ8IXQ9 262 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 NELL1Q92832 810 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 C12orf66Q96MD2 445 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ZCCHC2Q9C0B9 1178 aaKnown RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 TPT1P8Q9HAU6 139 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 MIEF1Q9NQG6 463 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 CCDC177Q9NQR7 707 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 HEATR5BQ9P2D3 2071 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 CARNS1A5YM72 827 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 C6orf47O95873 294 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 MAPK1P28482 360 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 OPRD1P41143 372 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 TAP2Q03519 686 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 FOXM1Q08050 763 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 GRIK2Q13002 908 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 RUNDC3AQ59EK9 446 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 TMEM179BQ7Z7N9 219 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 C11orf74Q86VG3 221 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PGBD3Q8N328 593 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 TCAIMQ8N3R3 496 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 DPP10Q8N608 796 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF557Q8N988 423 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ATL1Q8WXF7 558 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 FBXL8Q96CD0 374 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 FAM83CQ9BQN1 747 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 KAT8Q9H7Z6 458 aaKnown RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 SERHLQ9NQF3 203 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 RASSF1Q9NS23 344 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 PCDHGA11Q9Y5H2 935 aa12.26□□□□□ -0.45
SCAF11-209ENST00000547018 ARID1BQ8NFD5 2236 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-209ENST00000547018 H0Y8X5 98 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms