RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 HERC2P3Q9BVR0 1158 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 TPT1P8Q9HAU6 139 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 IL21Q9HBE4 155 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 B4GALT6Q9UBX8 382 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 ARHGEF15O94989 841 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 CD36P16671 472 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 TRPC1P48995 793 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 CYP27C1Q4G0S4 372 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 DPY19L3Q6ZPD9 716 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 EIF3MQ7L2H7 374 aaKnown RBP15.28■□□□□ 0.04
LDLR-204ENST00000545707 DSG4Q86SJ6 1040 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 ENTHD1Q8IYW4 607 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 LMNTD1Q8N9Z9 388 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 GPR156Q8NFN8 814 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 ELMO1Q92556 727 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 MED8Q96G25 268 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 ASPSCR1Q9BZE9 553 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 WDR12Q9GZL7 423 aaKnown RBP15.28■□□□□ 0.04
LDLR-204ENST00000545707 BRD9Q9H8M2 597 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 NECTIN3Q9NQS3 549 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 SACM1LQ9NTJ5 587 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 VPS29Q9UBQ0 182 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 RPS6KA6Q9UK32 745 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 FZD4Q9ULV1 537 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 TMED5Q9Y3A6 229 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 ANAPC1Q9H1A4 1944 aa15.28■□□□□ 0.04
LDLR-204ENST00000545707 GABRR3A8MPY1 467 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 HOXA2O43364 376 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 NUAK1O60285 661 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 C8GP07360 202 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 ATP1B2P14415 290 aaPredicted RBP15.27■□□□□ 0.04
LDLR-204ENST00000545707 JUPP14923 745 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 PRPH2P23942 346 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 GABRR2P28476 465 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 SP3Q02447 781 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 CAMK2GQ13555 558 aaPredicted RBP15.27■□□□□ 0.04
LDLR-204ENST00000545707 HKDC1Q2TB90 917 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 IQCCQ4KMZ1 466 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 USP45Q70EL2 814 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 TSPYL5Q86VY4 417 aaPredicted RBP15.27■□□□□ 0.04
LDLR-204ENST00000545707 CADM3Q8N126 398 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 OR6Q1Q8NGQ2 317 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 OR52J3Q8NH60 311 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 CSGALNACT1Q8TDX6 532 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 PROX1Q92786 737 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 RUBCNLQ9H714 662 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 PAIP2BQ9ULR5 123 aaKnown RBP15.27■□□□□ 0.04
LDLR-204ENST00000545707 TESMINQ9Y4I5 508 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 SCN8AQ9UQD0 1980 aa15.27■□□□□ 0.04
LDLR-204ENST00000545707 GFYI3L273 518 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.03
LDLR-204ENST00000545707 RRM2P31350 389 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 SRSF11Q05519 484 aaKnown RBP15.27■□□□□ 0.03
LDLR-204ENST00000545707 DOC2AQ14183 400 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 INAVAQ3KP66 663 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.27■□□□□ 0.03
LDLR-204ENST00000545707 ANGPTL8Q6UXH0 198 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 GAREM2Q75VX8 874 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 RNF168Q8IYW5 571 aaPredicted RBP15.27■□□□□ 0.03
LDLR-204ENST00000545707 C7orf34Q96L11 122 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 LYSMD1Q96S90 227 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 ZBTB20Q9HC78 741 aaPredicted RBP15.27■□□□□ 0.03
LDLR-204ENST00000545707 RAPGEFL1Q9UHV5 662 aa15.27■□□□□ 0.03
LDLR-204ENST00000545707 IGLV3-16A0A075B6K0 115 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 GBAP04062 536 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 CYP2A7P20853 494 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 HLA-FP30511 346 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 CA8P35219 290 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 TGFBR2P37173 567 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 LIPAP38571 399 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 MAPK8P45983 427 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 OR1E2P47887 323 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 CSNK1DP48730 415 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SPINT3P49223 89 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 EIF2B2P49770 351 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 HNMTP50135 292 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 NUDT6P53370 316 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 EPHB3P54753 998 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SNRPD1P62314 119 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 ACSM2AQ08AH3 577 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 GAB1Q13480 694 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 NAE1Q13564 534 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 HIST2H2ACQ16777 129 aaPredicted RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 ACSM2BQ68CK6 577 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 NAGSQ8N159 534 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 ELMOD1Q8N336 334 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 C1orf52Q8N6N3 182 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 CD99L2Q8TCZ2 262 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 TBC1D20Q96BZ9 403 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 DUSP26Q9BV47 211 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SLIRPQ9GZT3 109 aaKnown RBP15.26■□□□□ 0.03
LDLR-204ENST00000545707 RNF6Q9Y252 685 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 SH3BP1Q9Y3L3 701 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 PCDHGA6Q9Y5G7 932 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 INSL5Q9Y5Q6 135 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 TTC34A8MYJ7 566 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 TMEM229AB2RXF0 380 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 M0R129 80 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 PCDH7O60245 1069 aa15.26■□□□□ 0.03
LDLR-204ENST00000545707 PREPP48147 710 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms