RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 PCDHB11Q9Y5F2 797 aa12.17□□□□□ -0.46
COL4A6-209ENST00000545689 FAM25EA8MYX2 175 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 H3BSA7 217 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 IVDP26440 423 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 OR2B6P58173 313 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF763Q0D2J5 394 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 SMU1Q2TAY7 513 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF829Q3KNS6 432 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 SPANXN4Q5MJ08 99 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 IDNKQ5T6J7 187 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TREML1Q86YW5 311 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 IL12RB2Q99665 862 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 MAGIXQ9H6Y5 334 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TBCCD1Q9NVR7 557 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PPIEQ9UNP9 301 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PRODHO43272 600 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 GPR32O75388 356 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PENKP01210 267 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 FDXRP22570 491 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ARSFP54793 590 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ABATP80404 500 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 GHRHRQ02643 423 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 CBLBQ13191 982 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 C6orf136Q5SQH8 315 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 MEDAGQ5VYS4 303 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 MSANTD1Q6ZTZ1 278 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 OR9I1Q8NGQ6 314 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 CACNG4Q9UBN1 327 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TMEM150CB9EJG8 249 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 CLPXO76031 633 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 INMTO95050 263 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 BCHEP06276 602 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF823P16415 610 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TAS2R43P59537 309 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 OLIG2Q13516 323 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 RNF19BQ6ZMZ0 732 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PRR23CQ6ZRP0 262 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TMCO2Q7Z6W1 182 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 B3GALT6Q96L58 329 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TOR3AQ9H497 397 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 CDC14AQ9UNH5 594 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 HCN4Q9Y3Q4 1203 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 UQCRC2P22695 453 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 RBBP4Q09028 425 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TPRG1LQ5T0D9 272 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 GPRC6AQ5T6X5 926 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PGAP3Q96FM1 320 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 SLC38A3Q99624 504 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 AIG1Q9NVV5 245 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 DKK3Q9UBP4 350 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 UTS2RQ9UKP6 389 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 BAZ2AQ9UIF9 1905 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PRAMEF33A0A0G2JMD5 474 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TBX1O43435 398 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 MAFKO60675 156 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PRAMEF10O60809 474 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 GATBO75879 557 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 AZGP1P25311 298 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 CLCN7P51798 805 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 NFATC2Q13469 925 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 FAM46DQ8NEK8 389 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 THRSPQ92748 146 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 TNFRSF10DQ9UBN6 386 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 EXOSC1Q9Y3B2 195 aaKnown RBP12.16□□□□□ -0.46
COL4A6-209ENST00000545689 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
COL4A6-209ENST00000545689 POP7O75817 140 aaKnown RBP12.15□□□□□ -0.46
COL4A6-209ENST00000545689 S1PR4O95977 384 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 MAGP20916 626 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 CYBRD1Q53TN4 286 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 NIPAL1Q6NVV3 410 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 ANKFN1Q8N957 763 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 ERMAPQ96PL5 475 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-209ENST00000545689 TRIM36Q9NQ86 728 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 TDP1Q9NUW8 608 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 RIMKLBQ9ULI2 386 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 TMEM5Q9Y2B1 443 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 MYH6P13533 1939 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 FAM172BPA6NC97 362 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 ELOA3DA6NLF2 546 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-209ENST00000545689 ZNF879B4DU55 563 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 AOC2O75106 756 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 RGS20O76081 388 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 HLA-DPB1P04440 258 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 PRKCGP05129 697 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 KCNA5P22460 613 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 ELOA3BQ3SY89 546 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 RABL3Q5HYI8 236 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 TXNDC8Q6A555 127 aa12.15□□□□□ -0.46
COL4A6-209ENST00000545689 TMIGD1Q6UXZ0 262 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms