RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 H7C4K7 107 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SCAMP3O14828 347 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 SUV39H1O43463 412 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SOCS5O75159 536 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 B3GALT4O96024 378 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 APOA1P02647 267 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 KLKB1P03952 638 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ALPIP09923 528 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ADORA3P0DMS8 318 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 DBTP11182 482 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 CYBAP13498 195 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ATF6P18850 670 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SOX6P35712 828 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SPAM1P38567 509 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 MAPK8P45983 427 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 UGT2B15P54855 530 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ARPP19P56211 112 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 KCNJ10P78508 379 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 FAM189BP81408 668 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 FPGSQ05932 587 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.47□□□□□ -1.05
TDP1-204ENST00000545686 SP140Q13342 867 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 IRF3Q14653 427 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 TEAD4Q15561 434 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 UGT8Q16880 541 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 HKDC1Q2TB90 917 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 HECTD3Q5T447 861 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 C9orf131Q5VYM1 1079 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 FRG2Q64ET8 278 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 DESI1Q6ICB0 168 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 LINGO4Q6UY18 593 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 RASAL3Q86YV0 1011 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 METTL4Q8N3J2 472 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 FAM83FQ8NEG4 500 aaPredicted RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 FBXO22Q8NEZ5 403 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ERLEC1Q96DZ1 483 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 APIPQ96GX9 242 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 FRG2BQ96QU4 278 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 MYOCQ99972 504 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SLC12A9Q9BXP2 914 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 OR2B2Q9GZK3 357 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 VPS51Q9UID3 782 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 CFL2Q9Y281 166 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 PCDHGB6Q9Y5F9 930 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 TSPAN3O60637 253 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 UGDHO60701 494 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 AOC2O75106 756 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 LRATO95237 230 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 GJB5O95377 273 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 ANXA8P13928 327 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 BPIP17213 487 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 C21orf33P30042 268 aaPredicted RBP8.46□□□□□ -1.05
TDP1-204ENST00000545686 CA5AP35218 305 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 SLC19A1P41440 591 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 SEPHS1P49903 392 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 LRRC74AQ0VAA2 488 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 DUSP4Q13115 394 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 CDKN3Q16667 212 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 SPANXN2Q5MJ10 180 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 AGAP6Q5VW22 663 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.05
TDP1-204ENST00000545686 CCBE1Q6UXH8 406 aaPredicted RBP8.46□□□□□ -1.05
TDP1-204ENST00000545686 ZNF621Q6ZSS3 439 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 FAM124AQ86V42 546 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 SYT12Q8IV01 421 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 GALNT6Q8NCL4 622 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 SETD6Q8TBK2 473 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 GGHQ92820 318 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 UBE2FQ969M7 185 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 APOLD1Q96LR9 279 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 AGAP4Q96P64 663 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 DOHHQ9BU89 302 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 TPK1Q9H3S4 243 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 SIAEQ9HAT2 523 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 ENOPH1Q9UHY7 261 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 BTNL2Q9UIR0 455 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 STOML2Q9UJZ1 356 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 RUVBL1Q9Y265 456 aaKnown RBP8.46□□□□□ -1.05
TDP1-204ENST00000545686 TRAPPC4Q9Y296 219 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 LYVE1Q9Y5Y7 322 aa8.46□□□□□ -1.05
TDP1-204ENST00000545686 CASP8AP2Q9UKL3 1982 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 FAM172BPA6NC97 362 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 ZNF840PA6NDX5 716 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 SLC16A5O15375 505 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 COCHO43405 550 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 LATS1O95835 1130 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 MPC1LP0DKB6 136 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 COL6A1P12109 1028 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 COX7A2P14406 83 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 SPNP16150 400 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 ALOX12P18054 663 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 GABRB1P18505 474 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 RRM2P31350 389 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 PIK3CBP42338 1070 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 CSNK1DP48730 415 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 RGS6P49758 472 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 IFITM2Q01629 132 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 ELAVL2Q12926 359 aaKnown RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 SF3B4Q15427 424 aaKnown RBP eCLIP8.46□□□□□ -1.062e-7■■■■■ 32.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms