RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SUN1O94901 812 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 ANXA5P08758 320 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 PKMP14618 531 aaKnown RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 KLK2P20151 261 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 CTNNA1P35221 906 aaKnown RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 PPARGP37231 505 aaPredicted RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 AGTR2P50052 363 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 TPM4P67936 248 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 MAT1AQ00266 395 aaKnown RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 HSF1Q00613 529 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 PTK6Q13882 451 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 TRIM14Q14142 442 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 EXT1Q16394 746 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 TSTD2Q5T7W7 516 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 TMEM211Q6ICI0 200 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 ANKRD37Q7Z713 158 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 LINC00523Q86TU6 105 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 HORMAD2Q8N7B1 307 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 FAM98AQ8NCA5 519 aaKnown RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 PLPP5Q8NEB5 264 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 FAM57AQ8TBR7 257 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 MRFAP1L1Q96HT8 127 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 YIPF2Q9BWQ6 316 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 SLC24A3Q9HC58 644 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
RTN3-214ENST00000545432 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 TTC7AQ9ULT0 858 aaPredicted RBP13.88□□□□□ -0.19
RTN3-214ENST00000545432 HEATR5BQ9P2D3 2071 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 KRT87PA6NCN2 255 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 KPNA5O15131 536 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 NME2P1O60361 137 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 NSA2O95478 260 aaKnown RBP13.87□□□□□ -0.19
RTN3-214ENST00000545432 NME2P22392 152 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 RPS3P23396 243 aaKnown RBP eCLIP13.87□□□□□ -0.199e-10■■■■□ 20.7
RTN3-214ENST00000545432 CHRNB4P30926 498 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 BDKRB1P46663 353 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 ARHGAP19Q14CB8 494 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 TMED2Q15363 201 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 CCDC38Q502W7 563 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 CES4AQ5XG92 561 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 C3P1Q6ZMU1 363 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 SHISA5Q8N114 240 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 ARMC10Q8N2F6 343 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 MAGEC3Q8TD91 643 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 ZNF778Q96MU6 729 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 PANX3Q96QZ0 392 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 KCNK13Q9HB14 408 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 MRPS30Q9NP92 439 aaKnown RBP13.87□□□□□ -0.19
RTN3-214ENST00000545432 PIH1D1Q9NWS0 290 aaKnown RBP13.87□□□□□ -0.19
RTN3-214ENST00000545432 RNF6Q9Y252 685 aa13.87□□□□□ -0.19
RTN3-214ENST00000545432 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 MYO1CO00159 1063 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 P2RX6O15547 441 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 EZRP15311 586 aaKnown RBP13.86□□□□□ -0.19
RTN3-214ENST00000545432 ZNF24P17028 368 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 ADRA1DP25100 572 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 PTGS2P35354 604 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 FOLH1Q04609 750 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 CDH17Q12864 832 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 P3H1Q32P28 736 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 CCDC181Q5TID7 509 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 SLC5A8Q8N695 610 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 POGLUT1Q8NBL1 392 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 OR52K1Q8NGK4 314 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 OR9A1PQ8NGU1 263 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 C16orf52Q8NHV5 167 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 ELP5Q8TE02 316 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 SMPDL3AQ92484 453 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 FAM118BQ9BPY3 351 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 ZNF559Q9BR84 538 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 ANKRD10Q9NXR5 420 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 LRFN1Q9P244 771 aa13.86□□□□□ -0.19
RTN3-214ENST00000545432 KCNE1BA0A087WTH5 132 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 ERI2A8K979 691 aaKnown RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 CTNNA2P26232 953 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 ATP5DP30049 168 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 TRHRP34981 398 aaPredicted RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 AVPR1BP47901 424 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 ABATP80404 500 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 NDUFA9Q16795 377 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 FASTKD1Q53R41 847 aaKnown RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 AARS2Q5JTZ9 985 aaKnown RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 ZNF468Q5VIY5 522 aaPredicted RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 ICE2Q659A1 982 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 LRRC6Q86X45 466 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 OR51Q1Q8NH59 317 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 NRGNQ92686 78 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 ACAT2Q9BWD1 397 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 UCK2Q9BZX2 261 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 GSX1Q9H4S2 264 aaPredicted RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 KCNJ16Q9NPI9 418 aa13.85□□□□□ -0.19
RTN3-214ENST00000545432 CCM2LQ9NUG4 571 aaPredicted RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 UTP6Q9NYH9 597 aaKnown RBP13.85□□□□□ -0.19
RTN3-214ENST00000545432 A0A1B0GTH9 108 aa13.84□□□□□ -0.19
RTN3-214ENST00000545432 NKX2-6A6NCS4 301 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms