RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PRAMEF17Q5VTA0 474 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 IZUMO3Q5VZ72 239 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 KCTD16Q68DU8 428 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 TXNRD3NBQ6F5E7 133 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 FAM72DQ6L9T8 149 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 RETSATQ6NUM9 610 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 MFSD7Q6UXD7 560 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 Q6ZPB1 254 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 DPY19L3Q6ZPD9 716 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 FAM72BQ86X60 149 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 RFX6Q8HWS3 928 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 GLB1L2Q8IW92 636 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 LRRC75A-AS1Q8N1F1 130 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PYROXD2Q8N2H3 581 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 DTX3Q8N9I9 347 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 CLEC1AQ8NC01 280 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 OR5AN1Q8NGI8 311 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 OR2A12Q8NGT7 310 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PPP1R14CQ8TAE6 165 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 ACTRT1Q8TDG2 376 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 NSMCE1Q8WV22 266 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 CASKIN2Q8WXE0 1202 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 ALG3Q92685 438 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 P3H4Q92791 437 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 HOXB13Q92826 284 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 HAUS1Q96CS2 278 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PPP1R16AQ96I34 528 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 OR6C1Q96RD1 312 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 HERPUD2Q9BSE4 406 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 SOX7Q9BT81 388 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 RAB6CQ9H0N0 254 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 MBNL1Q9NR56 388 aaKnown RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 GPATCH2LQ9NWQ4 482 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 COQ3Q9NZJ6 369 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 KLQ9UEF7 1012 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 IL36AQ9UHA7 158 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
LDHA-223ENST00000545215 DNAI1Q9UI46 699 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 HPCAL4Q9UM19 191 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 NEU3Q9UQ49 428 aa6.48□□□□□ -1.37
LDHA-223ENST00000545215 PCLOQ9Y6V0 5065 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 CFAP69A5D8W1 941 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 HACD1B0YJ81 288 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 KDM4EB2RXH2 506 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 PGRMC1O00264 195 aaKnown RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 CEP104O60308 925 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 PIP5K1CO60331 668 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 CST8O60676 142 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 TMEM127O75204 238 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 ADRB3P13945 408 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 XPAP23025 273 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 MST1P26927 711 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 HALP42357 657 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 SERPINH1P50454 418 aaKnown RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 NRG3P56975 720 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 RAB1AP62820 205 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 IL13RA1P78552 427 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 GNA12Q03113 381 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 CKAP4Q07065 602 aaKnown RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 RFTN1Q14699 578 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 PLCL1Q15111 1095 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 THEMIS2Q5TEJ8 643 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 DRICH1Q6PGQ1 229 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 SYT10Q6XYQ8 523 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 TTC7BQ86TV6 843 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 SLC13A5Q86YT5 568 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 BBS5Q8N3I7 341 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 RASGEF1CQ8N431 466 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 OR2C3Q8N628 320 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 PCDH20Q8N6Y1 951 aaKnown RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 ANKRD42Q8N9B4 389 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 OR10G6Q8NH81 332 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 LILRB4Q8NHJ6 448 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 CCL4L1Q8NHW4 92 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 ABHD4Q8TB40 342 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 ITFG2Q969R8 447 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 ELMO2Q96JJ3 720 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 CNDP1Q96KN2 507 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 C16orf45Q96MC5 204 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 RUNDC3BQ96NL0 473 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 ZNF599Q96NL3 588 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 TSGA13Q96PP4 275 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 WDR24Q96S15 920 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 OSBPL9Q96SU4 736 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 TM6SF2Q9BZW4 377 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 KCNJ16Q9NPI9 418 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 MED4Q9NPJ6 270 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 ZNF212Q9UDV6 495 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 AMACRQ9UHK6 382 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 PACSIN2Q9UNF0 486 aaPredicted RBP6.47□□□□□ -1.37
LDHA-223ENST00000545215 SNX7Q9UNH6 387 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
LDHA-223ENST00000545215 VWFP04275 2813 aa6.46□□□□□ -1.38
LDHA-223ENST00000545215 KDELR3O43731 214 aa6.46□□□□□ -1.38
LDHA-223ENST00000545215 TLX2O43763 284 aaPredicted RBP6.46□□□□□ -1.38
LDHA-223ENST00000545215 SGTAO43765 313 aa6.46□□□□□ -1.38
LDHA-223ENST00000545215 PRAMEF2O60811 474 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms