RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 HS6ST1O60243 411 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 SLC25A12O75746 678 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 SUN1O94901 812 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 C1orf105O95561 183 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 SLC1A1P43005 524 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 MEOX1P50221 254 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 NUP107P57740 925 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 SNTB1Q13884 538 aaKnown RBP8.84□□□□□ -0.99
CHD4-212ENST00000545083 PRPSAP1Q14558 356 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 SEMA3AQ14563 771 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 MINDY4Q4G0A6 757 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 CMPK2Q5EBM0 449 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 KCTD11Q693B1 232 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 TMEM211Q6ICI0 200 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 BBS12Q6ZW61 710 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 PRSS41Q7RTY9 318 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 PAQR7Q86WK9 346 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 ZZZ3Q8IYH5 903 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 KRT222Q8N1A0 295 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 HMGCLL1Q8TB92 370 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 STYXQ8WUJ0 223 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 ASZ1Q8WWH4 475 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 RND1Q92730 232 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 RAD51AP1Q96B01 352 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 PWWP2AQ96N64 755 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 SPATA13Q96N96 652 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 OR2A5Q96R48 311 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 FAM118BQ9BPY3 351 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 BPIFA3Q9BQP9 254 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 PLCD4Q9BRC7 762 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 RAB11FIP5Q9BXF6 653 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 HEMGNQ9BXL5 484 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 MMP25Q9NPA2 562 aa8.84□□□□□ -0.99
CHD4-212ENST00000545083 FEZ2Q9UHY8 353 aaPredicted RBP8.84□□□□□ -0.99
CHD4-212ENST00000545083 SOWAHDA6NJG2 315 aa8.83□□□□□ -1
CHD4-212ENST00000545083 APOC4-APOC2K7ER74 178 aa8.83□□□□□ -1
CHD4-212ENST00000545083 TFECO14948 347 aaPredicted RBP8.83□□□□□ -1
CHD4-212ENST00000545083 PSTPIP1O43586 416 aa8.83□□□□□ -1
CHD4-212ENST00000545083 SPOPO43791 374 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CDC40O60508 579 aaKnown RBP eCLIP8.83□□□□□ -14e-9■■■□□ 17.6
CHD4-212ENST00000545083 SERPINC1P01008 464 aa8.83□□□□□ -1
CHD4-212ENST00000545083 APOC2P02655 101 aa8.83□□□□□ -1
CHD4-212ENST00000545083 STATHP02808 62 aa8.83□□□□□ -1
CHD4-212ENST00000545083 TFEBP19484 476 aa8.83□□□□□ -1
CHD4-212ENST00000545083 DNASE1P24855 282 aa8.83□□□□□ -1
CHD4-212ENST00000545083 AOAHP28039 575 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CMPK1P30085 196 aa8.83□□□□□ -1
CHD4-212ENST00000545083 PMPCAQ10713 525 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CCDC38Q502W7 563 aa8.83□□□□□ -1
CHD4-212ENST00000545083 MFSD4BQ5TF39 518 aa8.83□□□□□ -1
CHD4-212ENST00000545083 GARNL3Q5VVW2 1013 aa8.83□□□□□ -1
CHD4-212ENST00000545083 PAPD4Q6PIY7 484 aaKnown RBP8.83□□□□□ -1
CHD4-212ENST00000545083 SUSD1Q6UWL2 747 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CLEC9AQ6UXN8 241 aa8.83□□□□□ -1
CHD4-212ENST00000545083 ZNF534Q76KX8 674 aa8.83□□□□□ -1
CHD4-212ENST00000545083 PLD3Q8IV08 490 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CLYBLQ8N0X4 340 aa8.83□□□□□ -1
CHD4-212ENST00000545083 KIF2BQ8N4N8 673 aa8.83□□□□□ -1
CHD4-212ENST00000545083 OR13J1Q8NGT2 312 aa8.83□□□□□ -1
CHD4-212ENST00000545083 OR9A4Q8NGU2 314 aa8.83□□□□□ -1
CHD4-212ENST00000545083 M1APQ8TC57 530 aa8.83□□□□□ -1
CHD4-212ENST00000545083 ACTL9Q8TC94 416 aa8.83□□□□□ -1
CHD4-212ENST00000545083 RMND5BQ96G75 393 aaPredicted RBP8.83□□□□□ -1
CHD4-212ENST00000545083 C18orf12Q96KH6 178 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CARD6Q9BX69 1037 aa8.83□□□□□ -1
CHD4-212ENST00000545083 CLEC4MQ9H2X3 399 aaPredicted RBP8.83□□□□□ -1
CHD4-212ENST00000545083 TP63Q9H3D4 680 aaPredicted RBP8.83□□□□□ -1
CHD4-212ENST00000545083 CDCP1Q9H5V8 836 aa8.83□□□□□ -1
CHD4-212ENST00000545083 RASSF1Q9NS23 344 aa8.83□□□□□ -1
CHD4-212ENST00000545083 HCN3Q9P1Z3 774 aa8.83□□□□□ -1
CHD4-212ENST00000545083 C19orf25Q9UFG5 118 aaPredicted RBP8.83□□□□□ -1
CHD4-212ENST00000545083 SLC2A6Q9UGQ3 507 aa8.83□□□□□ -1
CHD4-212ENST00000545083 TTC7AQ9ULT0 858 aaPredicted RBP8.83□□□□□ -1
CHD4-212ENST00000545083 ZNF407Q9C0G0 2248 aa8.82□□□□□ -1
CHD4-212ENST00000545083 SMTNL1A8MU46 457 aa8.82□□□□□ -1
CHD4-212ENST00000545083 ARHGEF33A8MVX0 844 aa8.82□□□□□ -1
CHD4-212ENST00000545083 NDC80O14777 642 aa8.82□□□□□ -1
CHD4-212ENST00000545083 VPS26AO75436 327 aa8.82□□□□□ -1
CHD4-212ENST00000545083 PDE9AO76083 593 aa8.82□□□□□ -1
CHD4-212ENST00000545083 GOT2P00505 430 aaKnown RBP8.82□□□□□ -1
CHD4-212ENST00000545083 APOA4P06727 396 aa8.82□□□□□ -1
CHD4-212ENST00000545083 INHBBP09529 407 aa8.82□□□□□ -1
CHD4-212ENST00000545083 TPP2P29144 1249 aaPredicted RBP8.82□□□□□ -1
CHD4-212ENST00000545083 XCR1P46094 333 aa8.82□□□□□ -1
CHD4-212ENST00000545083 DGKQP52824 942 aa8.82□□□□□ -1
CHD4-212ENST00000545083 FAM53BQ14153 422 aa8.82□□□□□ -1
CHD4-212ENST00000545083 IQCB1Q15051 598 aa8.82□□□□□ -1
CHD4-212ENST00000545083 EXT1Q16394 746 aa8.82□□□□□ -1
CHD4-212ENST00000545083 SFT2D3Q587I9 215 aa8.82□□□□□ -1
CHD4-212ENST00000545083 ZNF425Q6IV72 752 aa8.82□□□□□ -1
CHD4-212ENST00000545083 LDB1Q86U70 411 aaPredicted RBP8.82□□□□□ -1
CHD4-212ENST00000545083 CDC20BQ86Y33 519 aa8.82□□□□□ -1
CHD4-212ENST00000545083 LIX1LQ8IVB5 337 aa8.82□□□□□ -1
CHD4-212ENST00000545083 SULF2Q8IWU5 870 aa8.82□□□□□ -1
CHD4-212ENST00000545083 RHOT2Q8IXI1 618 aa8.82□□□□□ -1
CHD4-212ENST00000545083 KATNAL2Q8IYT4 538 aa8.82□□□□□ -1
CHD4-212ENST00000545083 LGI4Q8N135 537 aa8.82□□□□□ -1
CHD4-212ENST00000545083 SLC5A8Q8N695 610 aa8.82□□□□□ -1
CHD4-212ENST00000545083 HORMAD2Q8N7B1 307 aa8.82□□□□□ -1
CHD4-212ENST00000545083 OR52N2Q8NGI0 321 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms