RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SLC35G4P0C7Q5 338 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PRR35P0CG20 571 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ZSCAN22P10073 491 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ENPP1P22413 925 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CXCR2P25025 360 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PON1P27169 355 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 EEF1DP29692 281 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 MC3RP41968 323 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 NSFP46459 744 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 HCAR3P49019 387 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ROM1Q03395 351 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM115Q12893 351 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PNOCQ13519 176 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PTPRRQ15256 657 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SYCP1Q15431 976 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CT83Q5H943 113 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF766Q5HY98 468 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF648Q5T619 568 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ERMARDQ5T6L9 678 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ZDHHC20Q5W0Z9 365 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ALS2CLQ60I27 953 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 METRNLQ641Q3 311 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ATG9BQ674R7 924 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TIGD7Q6NT04 549 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 HIBCHQ6NVY1 386 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PGM2L1Q6PCE3 622 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PODNL1Q6PEZ8 512 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 FBXO38Q6PIJ6 1188 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 WDR59Q6PJI9 974 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CNSTQ6PJW8 725 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CDHR3Q6ZTQ4 885 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 NLRP9Q7RTR0 991 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 C11orf96Q7Z7L8 435 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 DOLPP1Q86YN1 238 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PSTKQ8IV42 348 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 IGDCC3Q8IVU1 814 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PHC2Q8IXK0 858 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PGBD5Q8N414 524 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CPSF7Q8N684 471 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 NPWQ8N729 165 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 HORMAD2Q8N7B1 307 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM178AQ8NBL3 297 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 LPCAT1Q8NF37 534 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 OR4E2Q8NGC2 313 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 GDAP1Q8TB36 358 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 BRIX1Q8TDN6 353 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 MZB1Q8WU39 189 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SLC20A1Q8WUM9 679 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 LCN9Q8WX39 176 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 RND1Q92730 232 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SMARCE1Q969G3 411 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PPM1MQ96MI6 270 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 C11orf70Q9BRQ4 267 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 GPATCH1Q9BRR8 931 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TUBGCP2Q9BSJ2 902 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 BDH2Q9BUT1 245 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 BTBD2Q9BX70 525 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TDRD1Q9BXT4 1180 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SCAND2PQ9GZW5 306 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 DHX35Q9H5Z1 703 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PCDH9Q9HC56 1237 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF160Q9HCG1 818 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TCF7L1Q9HCS4 588 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ARFGAP3Q9NP61 516 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 GCM1Q9NP62 436 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 NT5MQ9NPB1 228 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 NLRC4Q9NPP4 1024 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 BEX4Q9NWD9 120 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PLA2G3Q9NZ20 509 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 LRFN1Q9P244 771 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 DHCR7Q9UBM7 475 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 AMACRQ9UHK6 382 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TMPRSS11EQ9UL52 423 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PSMD13Q9UNM6 376 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CHKBQ9Y259 395 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 LUC7L2Q9Y383 392 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 POLEQ07864 2286 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 MTORP42345 2549 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ANKHD1Q8IWZ3 2542 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SPG11Q96JI7 2443 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 A0A1W2PQ72 361 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 NKX2-6A6NCS4 301 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 ASPDHA6ND91 283 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 USP27XA6NNY8 438 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 ANKRD66B4E2M5 251 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 NPIPA5E9PKD4 350 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 H3BMH7 237 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 ADAM10O14672 748 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 RASGRF2O14827 1237 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 PRPSAP2O60256 369 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 GOSR1O95249 250 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 IL18BPO95998 194 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 CYP1A1P04798 512 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-220ENST00000544550 CLEC2LP0C7M8 214 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 PNMA6AP0CW24 399 aaPredicted RBP3.88□□□□□ -1.79
SNHG1-220ENST00000544550 ATP1A3P13637 1013 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 CCND1P24385 295 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 MTNR1BP49286 362 aa3.88□□□□□ -1.79
SNHG1-220ENST00000544550 STX17P56962 302 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms