RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	FAM162A	Q96A26	154 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	NUS1	Q96E22	293 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	FAM120B	Q96EK7	910 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	PPP1R16A	Q96I34	528 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	VPS50	Q96JG6	964 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	ZFYVE19	Q96K21	471 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	APOLD1	Q96LR9	279 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	RDH12	Q96NR8	316 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	SEPHS2	Q99611	448 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	TRIM4	Q9C037	500 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	RBM38	Q9H0Z9	239 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	KAT8	Q9H7Z6	458 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	CLK4	Q9HAZ1	481 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	VCX3A	Q9NNX9	186 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	FAM120C	Q9NX05	1096 aa	Known RBP	10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	ADGRE2	Q9UHX3	823 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	DMTF1	Q9Y222	760 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	INVS	Q9Y283	1065 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	PCDHB14	Q9Y5E9	798 aa		10.88	□□□□□ -0.67
LDHA-222	ENST00000543695	CKAP5	Q14008	2032 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	DMD	P11532	3685 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	EP300	Q09472	2414 aa	Predicted RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695		A0A087WXM4	84 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	C17orf113	A0A1B0GUU1	675 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	TMEM202	A6NGA9	273 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695		E7EQ34	232 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695		H3BM21	787 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	UPK1A	O00322	258 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	C1orf105	O95561	183 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SOD1	P00441	154 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	CD22	P20273	847 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	TACR1	P25103	407 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	IMPA1	P29218	277 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PTPN6	P29350	595 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	GSTT1	P30711	240 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PEX19	P40855	299 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	ASMT	P46597	345 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	BDKRB1	P46663	353 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	CXCL12	P48061	93 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PREP	P48147	710 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	ADARB1	P78563	741 aa	Known RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PLIN5	Q00G26	463 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	FOXK2	Q01167	660 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	NAE1	Q13564	534 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	GTF2H3	Q13889	308 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	DAG1	Q14118	895 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	MYBPC3	Q14896	1274 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	DUOXA1	Q1HG43	343 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	ITPRIPL2	Q3MIP1	535 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	GTDC1	Q4AE62	458 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	C9orf64	Q5T6V5	341 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	TSSK4	Q6SA08	328 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	RBM44	Q6ZP01	1051 aa	Known RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	USP51	Q70EK9	711 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SYT12	Q8IV01	421 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SVOPL	Q8N434	492 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SPEM1	Q8N4L4	309 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	FAM47B	Q8NA70	645 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SUMF1	Q8NBK3	374 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	ZFP28	Q8NHY6	868 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	FIG4	Q92562	907 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	REPS1	Q96D71	796 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	WDR34	Q96EX3	536 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SLC47A1	Q96FL8	570 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	REXO5	Q96IC2	774 aa	Known RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	ZNF514	Q96K75	400 aa	Predicted RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	LINC00615	Q96LM1	132 aa	Predicted RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	TSSK3	Q96PN8	268 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PKP4	Q99569	1192 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	WRAP53	Q9BUR4	548 aa	Known RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	GRIP2	Q9C0E4	1043 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	IKZF5	Q9H5V7	419 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	NTN4	Q9HB63	628 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PRMT8	Q9NR22	394 aa	Predicted RBP	10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	SIRT5	Q9NXA8	310 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PTTG2	Q9NZH5	202 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	DEC1	Q9P2X7	70 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	VPS29	Q9UBQ0	182 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	DNAJB9	Q9UBS3	223 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	ITM2B	Q9Y287	266 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	PCDHGA11	Q9Y5H2	935 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	FADS3	Q9Y5Q0	445 aa		10.87	□□□□□ -0.67
LDHA-222	ENST00000543695	EVPLL	A8MZ36	301 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	PRRT4	C9JH25	899 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	LILRB5	O75023	590 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	CREG1	O75629	220 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	RECQL5	O94762	991 aa	Predicted RBP	10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	ATP6V1B1	P15313	513 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	CTH	P32929	405 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	KIR3DL1	P43629	444 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	ID4	P47928	161 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	SLC6A11	P48066	632 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	SOX9	P48436	509 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	ALDH3A2	P51648	485 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	ROR2	Q01974	943 aa	Known RBP	10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	LRRC74A	Q0VAA2	488 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	EPS8	Q12929	822 aa		10.86	□□□□□ -0.67
LDHA-222	ENST00000543695	ELAVL3	Q14576	367 aa	Known RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms