RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 HSD3B2P26439 372 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 MZF1P28698 734 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 PCGF2P35227 344 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 PRMT2P55345 433 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 WNT3P56703 355 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 OLR1P78380 273 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SELENBP1Q13228 472 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SMN1Q16637 294 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 NDUFA5Q16718 116 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 UGT8Q16880 541 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 RETSATQ6NUM9 610 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 MBOAT1Q6ZNC8 495 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 UBE2R2Q712K3 238 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 CAMKMTQ7Z624 323 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 RPL3LQ92901 407 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 PYCR2Q96C36 320 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ALG14Q96F25 216 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 APIPQ96GX9 242 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 CHST8Q9H2A9 424 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 EHD1Q9H4M9 534 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 DNAJC11Q9NVH1 559 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 BTNL2Q9UIR0 455 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 RUVBL1Q9Y265 456 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 TESMINQ9Y4I5 508 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 CXorf51AA0A1B0GTR3 108 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 GFRA2O00451 464 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ADAMDEC1O15204 470 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 TBL1XO60907 577 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 MYO1DO94832 1006 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SNX4O95219 450 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 RPLP0P05388 317 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 HIST1H2AGP0C0S8 130 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 HIST1H2ADP20671 130 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 AOAHP28039 575 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ETV6P41212 452 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SLC11A1P49279 550 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 KCNC3Q14003 757 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 TEAD4Q15561 434 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 HKDC1Q2TB90 917 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 LIPJQ5W064 366 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ZDHHC20Q5W0Z9 365 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 VTCN1Q7Z7D3 282 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 DSG4Q86SJ6 1040 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 SYT12Q8IV01 421 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 DNAJC22Q8N4W6 341 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 PSMA8Q8TAA3 256 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 C9orf43Q8TAL5 461 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 DNASE1L2Q92874 299 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 MTFMTQ96DP5 389 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 CRELD1Q96HD1 420 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 HIST1H2AHQ96KK5 128 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 APOLD1Q96LR9 279 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 HIST1H2AJQ99878 128 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 H2AFJQ9BTM1 129 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
VPS33A-208ENST00000543633 ANAPC1Q9H1A4 1944 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 CLCA1A8K7I4 914 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 OR56A5P0C7T3 313 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 GSTT2P0CG29 244 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 GSTT2BP0CG30 244 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
VPS33A-208ENST00000543633 PTPN2P17706 415 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 CYP2A7P20853 494 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 HNF1BP35680 557 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 LIPAP38571 399 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 ASMTP46597 345 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 LAPTM4AQ15012 233 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 ARHGEF6Q15052 776 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 KCNJ8Q15842 424 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 TIGD6Q17RP2 521 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 AKAP14Q86UN6 197 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 DENND6BQ8NEG7 585 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 OR10Q1Q8NGQ4 319 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 COL21A1Q96P44 957 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 CASD1Q96PB1 797 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 COPS8Q99627 209 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 RHNO1Q9BSD3 238 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 SIRT5Q9NXA8 310 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 POFUT2Q9Y2G5 429 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 PCDHGA3Q9Y5H0 932 aa13.28□□□□□ -0.28
VPS33A-208ENST00000543633 PNMA8CA0A1B0GUJ8 204 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 M0R082 166 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 KPNA5O15131 536 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 SUV39H1O43463 412 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 RFPL2O75678 378 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 CLDN7O95471 211 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 ANXA8P13928 327 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 308.5 ms