RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ERVK-18Q9QC07 812 aa13.04□□□□□ -0.32
PPME1-208ENST00000543525 SLCO3A1Q9UIG8 710 aa13.04□□□□□ -0.32
PPME1-208ENST00000543525 BTNL2Q9UIR0 455 aa13.04□□□□□ -0.32
PPME1-208ENST00000543525 SAMHD1Q9Y3Z3 626 aaKnown RBP13.04□□□□□ -0.32
PPME1-208ENST00000543525 AP1M2Q9Y6Q5 423 aa13.04□□□□□ -0.32
PPME1-208ENST00000543525 BRCA2P51587 3418 aa13.04□□□□□ -0.32
PPME1-208ENST00000543525 H0YIV9 168 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SCAMP2O15127 329 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 XPNPEP2O43895 674 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 LILRB3O75022 631 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 MTX2O75431 263 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 PSIP1O75475 530 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 TFPTP0C1Z6 253 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 GJA1P17302 382 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 FMO3P31513 532 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 RXRGP48443 463 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ITGA1P56199 1179 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 AQP6Q13520 282 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 DDX39BQ13838 428 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 DMC1Q14565 340 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SYTL3Q4VX76 610 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 GPR155Q7Z3F1 870 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 HSD11B1LQ7Z5J1 315 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SYNPOQ8N3V7 929 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ZNF557Q8N988 423 aaPredicted RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 ABHD11Q8NFV4 315 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 E7EQ34 232 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SLC22A1O15245 554 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SGTAO43765 313 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 DPM1O60762 260 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 XYLBO75191 536 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 CATP04040 527 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 OCM2P0CE71 109 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 OCMP0CE72 109 aaPredicted RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 CYP4B1P13584 511 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 CD22P20273 847 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 PPM1AP35813 382 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 HPCAL1P37235 193 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 MAPK9P45984 424 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 NAE1Q13564 534 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 CPTPQ5TA50 214 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 AGTRAPQ6RW13 159 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 DCDC5Q6ZRR9 648 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 RAVER1Q8IY67 606 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 CLECL1Q8IZS7 167 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ATG16L2Q8NAA4 619 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SCAMP4Q969E2 229 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 TMEM159Q96B96 161 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
PPME1-208ENST00000543525 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 TPT1P8Q9HAU6 139 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 SGK2Q9HBY8 427 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 ASAH2Q9NR71 780 aa13.03□□□□□ -0.32
PPME1-208ENST00000543525 KRT87PA6NCN2 255 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 NEDD8-MDP1E9PL57 170 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 J3QRK9 145 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 GABARAPO95166 117 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 C9P02748 559 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 LAMP1P11279 417 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 SLC35A2P78381 396 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 VLDLRP98155 873 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 MVKQ03426 396 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 PCDH1Q08174 1060 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 LRRC74AQ0VAA2 488 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 LAPTM4AQ15012 233 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 CTF1Q16619 201 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 LDLRAP1Q5SW96 308 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 KIAA1614Q5VZ46 1190 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 LINC00299Q6ZSB3 139 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 VTCN1Q7Z7D3 282 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 TSPYL5Q86VY4 417 aaPredicted RBP13.02□□□□□ -0.32
PPME1-208ENST00000543525 TMEM25Q86YD3 366 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 EGFL6Q8IUX8 553 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 OR2A12Q8NGT7 310 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 CHPT1Q8WUD6 406 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 GLMNQ92990 594 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 SH3KBP1Q96B97 665 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 MED8Q96G25 268 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 ZNF347Q96SE7 839 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 CORO1BQ9BR76 489 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 ZSCAN5AQ9BUG6 496 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 NECTIN3Q9NQS3 549 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 STOX2Q9P2F5 926 aaPredicted RBP13.02□□□□□ -0.32
PPME1-208ENST00000543525 NFKBIL1Q9UBC1 381 aaPredicted RBP13.02□□□□□ -0.32
PPME1-208ENST00000543525 FBXO10Q9UK96 956 aa13.02□□□□□ -0.32
PPME1-208ENST00000543525 NDRG4Q9ULP0 352 aaKnown RBP13.02□□□□□ -0.32
PPME1-208ENST00000543525 FZD4Q9ULV1 537 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms