RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 GNGT2O14610 69 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 MID1O15344 667 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 TGFB1P01137 390 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 CAPGP40121 348 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ARSFP54793 590 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 NR1H2P55055 460 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ZNF33BQ06732 778 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 CES5AQ6NT32 575 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 OR5AR1Q8NGP9 310 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ZNF514Q96K75 400 aaPredicted RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ACAT2Q9BWD1 397 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 PBX4Q9BYU1 374 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ZDHHC5Q9C0B5 715 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 SPNS1Q9H2V7 528 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 AP3M1Q9Y2T2 418 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 TDRKHQ9Y2W6 561 aaKnown RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 DENND4AQ7Z401 1863 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 GOLGA4Q13439 2230 aaKnown RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 MGAT4DA6NG13 374 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 EPOPA6NHQ4 379 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 VILLO15195 856 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 LINC01565O15544 149 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 PRSS23O95084 383 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 FESP07332 822 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ACADLP28330 430 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ABHD18Q0P651 414 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 RBBP5Q15291 538 aaKnown RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 DPY19L1Q2PZI1 675 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 LRRC23Q53EV4 343 aaPredicted RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 IER5LQ5T953 404 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ANKRD34AQ69YU3 496 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 YAF2Q8IY57 180 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 CHPFQ8IZ52 775 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 FBXO15Q8NCQ5 510 aaPredicted RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ZNF740Q8NDX6 193 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 ZFP28Q8NHY6 868 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 CHTF18Q8WVB6 975 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 DGCR14Q96DF8 476 aaKnown RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 REXO5Q96IC2 774 aaKnown RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 DPH2Q9BQC3 489 aaPredicted RBP15.74■□□□□ 0.11
COL4A1-204ENST00000543140 DUSP26Q9BV47 211 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 SMURF2Q9HAU4 748 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 C8orf4Q9NR00 106 aa15.74■□□□□ 0.11
COL4A1-204ENST00000543140 G3V2T6 193 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 ZNF682O95780 498 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 RETP07949 1114 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 HSD3B1P14060 373 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 HSD3B2P26439 372 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 DRD3P35462 400 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 TRPC1P48995 793 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 CLCN2P51788 898 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 PNLIPRP1P54315 467 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 VAC14Q08AM6 782 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 C16orf72Q14CZ0 275 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 CPTPQ5TA50 214 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 PNCKQ6P2M8 343 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 ZDHHC13Q8IUH4 622 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 OR8J2Q8NGG1 315 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 HM13Q8TCT9 377 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 TMIGD2Q96BF3 282 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 HDAC8Q9BY41 377 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 OR51B5Q9H339 312 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 AASDHPPTQ9NRN7 309 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 SH3BP4Q9P0V3 963 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 DNAJB9Q9UBS3 223 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 PADI4Q9UM07 663 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 GPR34Q9UPC5 381 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 U3KQV3 271 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 PIPSLA2A3N6 862 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 SCAMP2O15127 329 aaKnown RBP15.73■□□□□ 0.11
COL4A1-204ENST00000543140 VEGFDO43915 354 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 NOBOXO60393 691 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 PRMT3O60678 531 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 EPN2O95208 641 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 C1GALT1C1LP0DN25 315 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 C7P10643 843 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 SOX9P48436 509 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 PCDH1Q08174 1060 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 SLC30A9Q6PML9 568 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 KLK6Q92876 244 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 LINC00615Q96LM1 132 aaPredicted RBP15.73■□□□□ 0.11
COL4A1-204ENST00000543140 HAUS8Q9BT25 410 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 SGPP1Q9BX95 441 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 OR52A5Q9H2C5 316 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 EPB41L1Q9H4G0 881 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 TRPV4Q9HBA0 871 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 NDUFA13Q9P0J0 144 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 SERGEFQ9UGK8 458 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 STON1Q9Y6Q2 735 aa15.73■□□□□ 0.11
COL4A1-204ENST00000543140 C17orf113A0A1B0GUU1 675 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 PRR23AA6NEV1 266 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 PCDH7O60245 1069 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 ALBP02768 609 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 ALPLP05186 524 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 TAS2R38P59533 333 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 FCHO2Q0JRZ9 810 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 DAG1Q14118 895 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 SPIDRQ14159 915 aa15.72■□□□□ 0.11
COL4A1-204ENST00000543140 WSCD2Q2TBF2 565 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms