RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 NTRK1P04629 796 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 LIPCP11150 499 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 EPB42P16452 691 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 ATP5F1P24539 256 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 EEF1DP29692 281 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 REEP5Q00765 189 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 MEF2AQ02078 507 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 PCDH1Q08174 1060 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 MAP7Q14244 749 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 TNFAIP8L3Q5GJ75 292 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 WASHC2DQ5SRD0 308 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 DTX1Q86Y01 620 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 TBC1D19Q8N5T2 526 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 TEX9Q8N6V9 391 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 ZNF655Q8N720 491 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 ZNF248Q8NDW4 579 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 RERGQ96A58 199 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 WDR34Q96EX3 536 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 SMC6Q96SB8 1091 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 AIF1LQ9BQI0 150 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 SPNS1Q9H2V7 528 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 CENPHQ9H3R5 247 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 ACTR5Q9H9F9 607 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 ANGPTL3Q9Y5C1 460 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 PCDHGA4Q9Y5G9 962 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 IGF2RP11717 2491 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 FEZF1A0PJY2 475 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 FITM1A5D6W6 292 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 E2F3O00716 465 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 LCMT2O60294 686 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 RAD1O60671 282 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 EIF2S1P05198 315 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 HBQ1P09105 142 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 CXCR2P25025 360 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 VARSP26640 1264 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 BCL6P41182 706 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 GCGRP47871 477 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 PIK3CGP48736 1102 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 GTF2H2Q13888 395 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 GRM7Q14831 915 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 PRTGQ2VWP7 1150 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 YOD1Q5VVQ6 348 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 GTF2H2CQ6P1K8 395 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 C6orf15Q6UXA7 325 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 TIPARPQ7Z3E1 657 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 PROSER1Q86XN7 944 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 SLC22A9Q8IVM8 553 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 MFSD9Q8NBP5 474 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 SLC38A9Q8NBW4 561 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 ZNF740Q8NDX6 193 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 RDH11Q8TC12 318 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 RNF31Q96EP0 1072 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 LRFN5Q96NI6 719 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 NDC1Q9BTX1 674 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 C1QTNF3Q9BXJ4 246 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 STARD5Q9NSY2 213 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 SRPK3Q9UPE1 567 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 PLLPQ9Y342 182 aa16.35■□□□□ 0.21
RABGGTA-203ENST00000543002 FREM2Q5SZK8 3169 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 G3V2L1 256 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 TAF4O00268 1085 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 TXNDC9O14530 226 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 OR1F1O43749 312 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 KATNA1O75449 491 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 RPS17P08708 135 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 MYZAPP0CAP1 466 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 CREB1P16220 341 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 EIF2S3P41091 472 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 CASP2P42575 452 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 SCTRP47872 440 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 ARSFP54793 590 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 IRF8Q02556 426 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 CHIT1Q13231 466 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 DOC2AQ14183 400 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 E2F2Q14209 437 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 SLBPQ14493 270 aaKnown RBP eCLIP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 TBCCQ15814 346 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 XKR6Q5GH73 641 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 RHBDD2Q6NTF9 364 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 ZYG11AQ6WRX3 759 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 GOLGA7Q7Z5G4 137 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 VN1R4Q7Z5H5 301 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 EXOC3L1Q86VI1 746 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 NLGN4XQ8N0W4 816 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 ESX1Q8N693 406 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 CSNK1A1LQ8N752 337 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 TTC29Q8NA56 475 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 GALNT6Q8NCL4 622 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 NLGN4YQ8NFZ3 816 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 KCNE4Q8WWG9 221 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 NKD1Q969G9 470 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 ZBTB9Q96C00 473 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 CLIP3Q96DZ5 547 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 CCDC126Q96EE4 140 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 PTCD3Q96EY7 689 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 RUFY1Q96T51 708 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 EFCAB11Q9BUY7 163 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms