RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CLPTM1LQ96KA5 538 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 UBXN10Q96LJ8 280 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TCEANC2Q96MN5 208 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PKP4Q99569 1192 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PKP2Q99959 881 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 NUDT16L1Q9BRJ7 211 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TTYH2Q9BSA4 534 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MYL10Q9BUA6 226 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FUNDC2Q9BWH2 189 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TTLL2Q9BWV7 592 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 NFKBIZQ9BYH8 718 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ACPTQ9BZG2 426 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TRIM31Q9BZY9 425 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 NUAK2Q9H093 628 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MUC13Q9H3R2 512 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 COQ10BQ9H8M1 238 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 COPS7BQ9H9Q2 264 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CCNB1IP1Q9NPC3 277 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 IL26Q9NPH9 171 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ASCL3Q9NQ33 180 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ABCB10Q9NRK6 738 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 KRT84Q9NSB2 600 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SDHAF2Q9NX18 166 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DUS2Q9NX74 493 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ERVK13-1Q9NX77 482 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ELOVL2Q9NXB9 296 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CFAP97Q9P2B7 532 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MYEF2Q9P2K5 600 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ERVK-18Q9QC07 812 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 XPR1Q9UBH6 696 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MIOXQ9UGB7 285 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 IL19Q9UHD0 177 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 OSGIN1Q9UJX0 560 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DLGAP4Q9Y2H0 992 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 POLR3HQ9Y535 204 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHA2Q9Y5H9 948 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ARFGEF2Q9Y6D5 1785 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DOT1LQ8TEK3 1739 aa4.21□□□□□ -1.73
SNHG1-219ENST00000542112 NUP98P52948 1817 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SPEF2Q9C093 1822 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 A0A075B6Q4 140 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 A0A087X0T9 212 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 A0A0B4J293 547 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KLF18A0A0U1RQI7 1052 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 C2orf92A0A1B0GVN3 265 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ATP6AP2A0A1C7CYW4 349 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 A0A1W2PN81 502 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GNG14A0A1W2PPG7 69 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TCRBV3S1A0A5B6 114 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 C9orf170A2RU37 121 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SYNDIG1LA6NDD5 238 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 AQP12BA6NM10 295 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF99A8MXY4 864 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 POC1B-GALNT4F8VUJ3 575 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 G3V2T6 193 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TMEM189-UBE2V1I3L0A0 370 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ACOT8O14734 319 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TCAPO15273 167 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PSMD3O43242 534 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 B4GAT1O43505 415 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TGM5O43548 720 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 VEGFDO43915 354 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 MSCO60682 206 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SNNO75324 88 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ULK1O75385 1050 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 AHSA1O95433 338 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TDP2O95551 362 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 IL33O95760 270 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PEX11BO96011 259 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HPRP00739 348 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 F9P00740 461 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 DNTTP04053 509 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SOD2P04179 222 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 APRTP07741 180 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GJB1P08034 283 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HOXC4P09017 264 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HOXB7P09629 217 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ADORA3P0DMS8 318 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF250P15622 560 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CD36P16671 472 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HDCP19113 662 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KCNA5P22460 613 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PTAFRP25105 342 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ATP5A1P25705 553 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ITGB8P26012 769 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SDHAP31040 664 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CA5AP35218 305 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PCGF2P35227 344 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 RFC2P35250 354 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CHRNA7P36544 502 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 WNT5AP41221 380 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GRIA3P42263 894 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KIR2DL1P43626 348 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KIR2DL2P43627 348 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PIK3CGP48736 1102 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 METAP2P50579 478 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PRELPP51888 382 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 MAP2K6P52564 334 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PKNOX1P55347 436 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 RPP30P78346 268 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms