RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TINAGQ9UJW2 476 aa14.64□□□□□ -0.07
CLSTN3-213ENST00000541953 OR5H15A6NDH6 313 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 KPNA5O15131 536 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 FDXRP22570 491 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 HTR1EP28566 365 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 ATP5DP30049 168 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 CLCN7P51798 805 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 PRDX1Q06830 199 aaKnown RBP14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 C3AR1Q16581 482 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 ANKRD20A4Q4UJ75 823 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 ZNF549Q6P9A3 640 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 TMEM207Q6UWW9 146 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 RIPOR1Q6ZS17 1223 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 REXO1L1PQ8IX06 675 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 BEST3Q8N1M1 668 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 RAB42Q8N4Z0 105 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 MVB12AQ96EY5 273 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 TRIM8Q9BZR9 551 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 IL22Q9GZX6 179 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 RNF32Q9H0A6 362 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 CDC14AQ9UNH5 594 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 KLF2Q9Y5W3 355 aaPredicted RBP14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 CACNA1CQ13936 2221 aa14.63□□□□□ -0.07
CLSTN3-213ENST00000541953 SMAPO00193 183 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 PRAMEF2O60811 474 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 VPS26AO75436 327 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 RASAL1O95294 804 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 UQCRHP07919 91 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 C8orf89P0DMQ9 161 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 EZRP15311 586 aaKnown RBP14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 CHRM3P20309 590 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 KRTAP10-9P60411 292 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 NAA30Q147X3 362 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 BNC2Q6ZN30 1099 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 ADCK2Q7Z695 626 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 ZNF295-AS1Q8N0V1 137 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 LURAP1Q96LR2 239 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 FRMD8P1Q9BZ68 369 aaPredicted RBP14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 ANKRD10Q9NXR5 420 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 HCN3Q9P1Z3 774 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 SOX13Q9UN79 622 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 NF1P21359 2839 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 C2CD3Q4AC94 2353 aa14.62□□□□□ -0.07
CLSTN3-213ENST00000541953 A8MUI8 341 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 H7BY64 318 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ESR1P03372 595 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ANXA5P08758 320 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 PKMP14618 531 aaKnown RBP14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 IL1RNP18510 177 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 IMPA1P29218 277 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 NPY2RP49146 381 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 TRIP13Q15645 432 aaPredicted RBP14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ZNF630Q2M218 657 aaPredicted RBP14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ZNF766Q5HY98 468 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ABHD17BQ5VST6 288 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ANKRD22Q5VYY1 191 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 KIAA0930Q6ICG6 404 aaPredicted RBP14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 MBOAT1Q6ZNC8 495 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 PDSS2Q86YH6 399 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 CILP2Q8IUL8 1156 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 DENND6AQ8IWF6 608 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 AGGF1Q8N302 714 aaeCLIP14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 ZNF808Q8N4W9 903 aaPredicted RBP14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 MDS2Q8NDY4 140 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 MAGEC3Q8TD91 643 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 PRAP1Q96NZ9 151 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 TUBB6Q9BUF5 446 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 RBCK1Q9BYM8 510 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 STMN3Q9NZ72 180 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 BFARQ9NZS9 450 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 MRFAP1Q9Y605 127 aa14.61□□□□□ -0.07
CLSTN3-213ENST00000541953 SGK494L7N484 410 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 PRPF4O43172 522 aaKnown RBP eCLIP14.6□□□□□ -0.076e-6■■■■□ 19.9
CLSTN3-213ENST00000541953 SLC19A2O60779 497 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 PHF2O75151 1096 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 SYF2O95926 243 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 OGNP20774 298 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 COILP38432 576 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 ADARP55265 1226 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 TUBA3CQ13748 450 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 FAM53BQ14153 422 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 ARHGAP19Q14CB8 494 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 CCNG2Q16589 344 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 BTBD16Q32M84 506 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 MINDY4Q4G0A6 757 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 MRNIPQ6NTE8 343 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 TUBA3EQ6PEY2 450 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 CYHR1Q6ZMK1 362 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 PIWIL4Q7Z3Z4 852 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 GDF7Q7Z4P5 450 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 CPEB2Q7Z5Q1 589 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 CAND1Q86VP6 1230 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 CRLF3Q8IUI8 442 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 PRELID2Q8N945 189 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 ZCCHC10Q8TBK6 192 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 ADAMTS18Q8TE60 1221 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 RERGQ96A58 199 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 MOCOSQ96EN8 888 aa14.6□□□□□ -0.07
CLSTN3-213ENST00000541953 CYTH2Q99418 400 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms