RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PCOLCE2Q9UKZ9 415 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 SH2B3Q9UQQ2 575 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 COLEC10Q9Y6Z7 277 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 LRP4O75096 1905 aa8.38□□□□□ -1.07
THBS3-210ENST00000541576 PLXND1Q9Y4D7 1925 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 LSM1O15116 133 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 PDYNP01213 254 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 VARSP26640 1264 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 MAOBP27338 520 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 CD38P28907 300 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 CASP2P42575 452 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 BLKP51451 505 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RACK1P63244 317 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 CYLC2Q14093 348 aaPredicted RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 RPS6KA2Q15349 733 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 GSTA3Q16772 222 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 AP5B1Q2VPB7 878 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 C6orf52Q5T4I8 152 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 LCTLQ6UWM7 567 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 NRROSQ86YC3 692 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 C1orf50Q9BV19 199 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RAB11FIP5Q9BXF6 653 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 GSDMCQ9BYG8 508 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 TCEAL2Q9H3H9 227 aaPredicted RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 GPR45Q9Y5Y3 372 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 TTC28Q96AY4 2481 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 DNAH14Q0VDD8 3507 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 GOLGA4Q13439 2230 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 C9JVG2 144 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 H0YIV9 168 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 AIM2O14862 343 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 KDM1AO60341 852 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 F3P13726 295 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 BCKDHBP21953 392 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 NDUFS1P28331 727 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 MRPS22P82650 360 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 DMWDQ09019 674 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 E2F2Q14209 437 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 HERC3Q15034 1050 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RFTN2Q52LD8 501 aaPredicted RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 CATSPEREQ5SY80 951 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 MIER2Q8N344 545 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 OR52E1Q8NGJ3 308 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 GPBAR1Q8TDU6 330 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 TEX37Q96LM6 180 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 EFCAB11Q9BUY7 163 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 ACAT2Q9BWD1 397 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 PCBD2Q9H0N5 130 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 C1orf21Q9H246 121 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 EHD1Q9H4M9 534 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 SDR39U1Q9NRG7 319 aaPredicted RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 TAC3Q9UHF0 121 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 KLF15Q9UIH9 416 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 PAIP2BQ9ULR5 123 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 PCDHGA4Q9Y5G9 962 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 FANCMQ8IYD8 2048 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 TDRD6O60522 2096 aaKnown RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 PRAMEF33A0A0G2JMD5 474 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 A0A1W2PR77 199 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 A6NCN8 305 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 SEC24DO94855 1032 aaPredicted RBP8.37□□□□□ -1.07
THBS3-210ENST00000541576 CTSEP14091 401 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 UQCRBP14927 111 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 ITGAXP20702 1163 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 CHN2P52757 468 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 EMX2Q04743 252 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 MAPRE2Q15555 327 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 PAGE2BQ5JRK9 111 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 ATG9BQ674R7 924 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 NXPE4Q6UWF7 544 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 LAYNQ6UX15 382 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RNF111Q6ZNA4 994 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 LPCAT2Q7L5N7 544 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 IQCHQ86VS3 1027 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RNF175Q8N4F7 328 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 TRIML2Q8N7C3 387 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 LINC01555Q8NAE3 123 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 ZFP28Q8NHY6 868 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RCN3Q96D15 328 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 CXorf40BQ96DE9 158 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 WDR34Q96EX3 536 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 RTKNQ9BST9 563 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 ACPTQ9BZG2 426 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 SEMA6AQ9H2E6 1030 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 XKR8Q9H6D3 395 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 KIR3DX1Q9H7L2 352 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 AIG1Q9NVV5 245 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 DTNAQ9Y4J8 743 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
THBS3-210ENST00000541576 FBP2O00757 339 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 WNT1P04628 370 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 C1GALT1C1LP0DN25 315 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 SLC2A4P14672 509 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 PKLRP30613 574 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 ACADVLP49748 655 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 ACTR3P61158 418 aa8.36□□□□□ -1.07
THBS3-210ENST00000541576 RPL38P63173 70 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms