RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CPA6Q8N4T0 437 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SPATA22Q8NHS9 363 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 BLOC1S5Q8TDH9 187 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SH3RF2Q8TEC5 729 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 CHTF18Q8WVB6 975 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 FAR1Q8WVX9 515 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SLC13A3Q8WWT9 602 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 RLN3Q8WXF3 142 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 NDRG1Q92597 394 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 TADA1Q96BN2 335 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 PYURFQ96I23 114 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ZNF300Q96RE9 604 aaPredicted RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 DGCR6LQ9BY27 220 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ZYG11BQ9C0D3 744 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 SLC39A8Q9C0K1 460 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 NAA50Q9GZZ1 169 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 NTN4Q9HB63 628 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.1□□□□□ -0.799e-6■□□□□ 10.4
CHFR-219ENST00000541341 TRMT6Q9UJA5 497 aaKnown RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 OSGIN1Q9UJX0 560 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 ZNF221Q9UK13 617 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 CFL2Q9Y281 166 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 PCDHB1Q9Y5F3 818 aa10.1□□□□□ -0.79
CHFR-219ENST00000541341 TP53BP1Q12888 1972 aaPredicted RBP10.1□□□□□ -0.79
CHFR-219ENST00000541341 ASCC3Q8N3C0 2202 aaKnown RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 AGAP5A6NIR3 686 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 UPK1AO00322 258 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 WNT9AO14904 365 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TLR5O60602 858 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TRIM3O75382 744 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 APBB3O95704 486 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 RPLP0P05388 317 aaKnown RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 SERPINF2P08697 491 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 FPR1P21462 350 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 CASP2P42575 452 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 SLC6A11P48066 632 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 MAPKAPK2P49137 400 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 DHPSP49366 369 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 RGS4P49798 205 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 SLC7A9P82251 487 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 ZXDBP98169 803 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 ITKQ08881 620 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 MESP2Q0VG99 397 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 CLCA4Q14CN2 919 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TBCEQ15813 527 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 EML3Q32P44 896 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 ZIK1Q3SY52 487 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 TIGD2Q4W5G0 525 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 RABL3Q5HYI8 236 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 PITRM1Q5JRX3 1037 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 LYPLAL1Q5VWZ2 237 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 KIAA1211LQ6NV74 962 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 SLC2A7Q6PXP3 512 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 DLEU7Q6UYE1 221 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 CERS6Q6ZMG9 384 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 NANOGNBQ7Z5D8 188 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 GPSM1Q86YR5 675 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 P3H2Q8IVL5 708 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 DTWD1Q8N5C7 304 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TSTD1Q8NFU3 115 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 OR52K2Q8NGK3 314 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 PROKR1Q8TCW9 393 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 FAM120BQ96EK7 910 aaKnown RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 ZNF486Q96H40 463 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 ITCHQ96J02 903 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TRAF4Q9BUZ4 470 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 THUMPD3Q9BV44 507 aaKnown RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 SLC29A3Q9BZD2 475 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 DPY30Q9C005 99 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TPK1Q9H3S4 243 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 SLA2Q9H6Q3 261 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 CCSER2Q9H7U1 834 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 FSCN3Q9NQT6 498 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 NLE1Q9NVX2 485 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 TMEM248Q9NWD8 314 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.09□□□□□ -0.79
CHFR-219ENST00000541341 SFMBT1Q9UHJ3 866 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 NUDT5Q9UKK9 219 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 PCTPQ9UKL6 214 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TLR6Q9Y2C9 796 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 KLK4Q9Y5K2 254 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 GMPPBQ9Y5P6 360 aa10.09□□□□□ -0.79
CHFR-219ENST00000541341 TMEM131Q92545 1883 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 A0A096LPI6 279 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 LNP1A1A4G5 178 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CENPXA8MT69 81 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PDZK1P1A8MUH7 402 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 K7EQS6 105 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 HAT1O14929 419 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 COCHO43405 550 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PRMT3O60678 531 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 FAM20BO75063 409 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PAGE1O75459 146 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 ESR1P03372 595 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 MTHFD2P13995 350 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CD1EP15812 388 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms