RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GGHQ92820 318 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 PDLIM5Q96HC4 596 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 SAMD11Q96NU1 681 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 COPS8Q99627 209 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 BEX2Q9BXY8 128 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 MAGIXQ9H6Y5 334 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 RMND5AQ9H871 391 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 OGDHLQ9ULD0 1010 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CHD7Q9P2D1 2997 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CKAP5Q14008 2032 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 NPIPB15A6NHN6 443 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 SAP18O00422 153 aaKnown RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 LRRTM2O43300 516 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCNDBP1O95273 360 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 IGFBP1P08833 259 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 ALOX5P09917 674 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 FEN1P39748 380 aaKnown RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 CASP3P42574 277 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 STK19P49842 368 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 B4GALNT1Q00973 533 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 CAP1Q01518 475 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 PLD1Q13393 1074 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 TSTA3Q13630 321 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 COL9A2Q14055 689 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 HKDC1Q2TB90 917 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 NEK10Q6ZWH5 1172 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 UBE2R2Q712K3 238 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 PRSS48Q7RTY5 328 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 CYP2U1Q7Z449 544 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 NANOGNBQ7Z5D8 188 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 BCDIN3DQ7Z5W3 292 aaKnown RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 LILRA3Q8N6C8 439 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 GLB1L3Q8NCI6 653 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR5AK3PQ8NH89 298 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC38A4Q969I6 547 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 P2RY13Q9BPV8 354 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 HOXD1Q9GZZ0 328 aa10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 OLA1Q9NTK5 396 aaKnown RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 SAMD4AQ9UPU9 718 aaKnown RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 DNMT3AQ9Y6K1 912 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-207ENST00000540998 SPEGQ15772 3267 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 GLYATL1P3A0A0U1RQE8 302 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 PRAMEF25A6NGN4 478 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 EVPLLA8MZ36 301 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 WWP2O00308 870 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 WNT9AO14904 365 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 TFECO14948 347 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 EBLN1P0CF75 366 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ELNP15502 786 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 DGKAP23743 735 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ACRV1P26436 265 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 CTSKP43235 329 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 TRPC1P48995 793 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 CDH12P55289 794 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 RING1Q06587 406 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 CCSMST1Q4G0I0 132 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ATP13A5Q4VNC0 1218 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 RSBN1Q5VWQ0 802 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 WDR53Q7Z5U6 358 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 RBFAQ8N0V3 343 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 NAGSQ8N159 534 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 UROC1Q96N76 676 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 MARCH5Q9NX47 278 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 PNMA8CA0A1B0GUJ8 204 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 KMOO15229 486 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 CLDN11O75508 207 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 GCM2O75603 506 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 KRT6AP02538 564 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 KRT6BP04259 564 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ADORA3P0DMS8 318 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 POU1F1P28069 291 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 PPP3CCP48454 512 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 KRT6CP48668 564 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 SLC11A1P49279 550 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 KEAP1Q14145 624 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 TAB1Q15750 504 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 RFX4Q33E94 735 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 IQCCQ4KMZ1 466 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ARMCX4Q5H9R4 360 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 IER5LQ5T953 404 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 MFSD14CQ5VZR4 134 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 TSPYL5Q86VY4 417 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 SVOPQ8N4V2 548 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF675Q8TD23 568 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 NDEL1Q9GZM8 345 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 TRIM39Q9HCM9 518 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 PLSCR3Q9NRY6 295 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 PCDHGA3Q9Y5H0 932 aa10.02□□□□□ -0.81
CDC42SE1-207ENST00000540998 ILVBLA1L0T0 632 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF840PA6NDX5 716 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 TMEM202A6NGA9 273 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 MAGEB17A8MXT2 336 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 FZD6O60353 706 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 MFN2O95140 757 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 CKMT1AP12532 417 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 ETFAP13804 333 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 GJA8P48165 433 aa10.01□□□□□ -0.81
CDC42SE1-207ENST00000540998 KCNJ10P78508 379 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms