RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CCNG1P51959 295 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 RAP1GDS1P52306 607 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 MAPK10P53779 464 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 KRTAP10-9P60411 292 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 RPS21P63220 83 aaKnown RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 ELF3P78545 371 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 TMEM115Q12893 351 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 SGCGQ13326 291 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 TUBB3Q13509 450 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 GTF2H2Q13888 395 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 MAP7Q14244 749 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 GBX1Q14549 363 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 PDCD2Q16342 344 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 OGFOD2Q6N063 350 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 GTF2H2CQ6P1K8 395 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 USP30Q70CQ3 517 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 NET1Q7Z628 596 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 MIER2Q8N344 545 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 CLDN19Q8N6F1 224 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 TRPC4APQ8TEL6 797 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 AGAP11Q8TF27 550 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 SKA2Q8WVK7 121 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 ASB11Q8WXH4 323 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 ELMO1Q92556 727 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 JADE3Q92613 823 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 SLC7A6OSQ96CW6 309 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 LINC00615Q96LM1 132 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 C5orf34Q96MH7 638 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 FAM129BQ96TA1 746 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 CCDC3Q9BQI4 270 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 EBF4Q9BQW3 602 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 DPEP2Q9H4A9 486 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 GSX1Q9H4S2 264 aaPredicted RBP8.09□□□□□ -1.11
CHD4-208ENST00000540960 ZBTB26Q9HCK0 441 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 ARL8BQ9NVJ2 186 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 NMRK1Q9NWW6 199 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 TRPS1Q9UHF7 1281 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 SNX6Q9UNH7 406 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 SLC5A6Q9Y289 635 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 LOXL2Q9Y4K0 774 aa8.09□□□□□ -1.11
CHD4-208ENST00000540960 NEMP2A6NFY4 417 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 A8MX80 341 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 ANKRD65E5RJM6 399 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 E9PBE3 544 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 GFYI3L273 518 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 E2F3O00716 465 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 SDHDO14521 159 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 TOR1BO14657 336 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 KLHL41O60662 606 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 RECQL5O94762 991 aaPredicted RBP8.08□□□□□ -1.12
CHD4-208ENST00000540960 MATN4O95460 622 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 CLDN9O95484 217 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 CTSLP07711 333 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 PRSS56P0CW18 603 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 ALPPL2P10696 532 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 KELP23276 732 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 PIK3R1P27986 724 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 EPHA3P29320 983 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 HMOX2P30519 316 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 NUDT1P36639 197 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 ARL1P40616 181 aaPredicted RBP8.08□□□□□ -1.12
CHD4-208ENST00000540960 KCNC1P48547 511 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 SH3BP2P78314 561 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 BTKQ06187 659 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 HSPA14Q0VDF9 509 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 EIF3IQ13347 325 aaKnown RBP8.08□□□□□ -1.12
CHD4-208ENST00000540960 CST6Q15828 149 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 PPP1R3AQ16821 1122 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 MMEL1Q495T6 779 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 GGTA1PQ4G0N0 100 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 NADK2Q4G0N4 442 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 SLC9B1Q4ZJI4 515 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 ATP6AP1LQ52LC2 224 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 ACSBG2Q5FVE4 666 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 CES4AQ5XG92 561 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 SBSNQ6UWP8 590 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 HACD2Q6Y1H2 254 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 UBE2R2Q712K3 238 aaPredicted RBP8.08□□□□□ -1.12
CHD4-208ENST00000540960 MAVSQ7Z434 540 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 MILR1Q7Z6M3 343 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 IQCHQ86VS3 1027 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 MMAAQ8IVH4 418 aaKnown RBP8.08□□□□□ -1.12
CHD4-208ENST00000540960 SCUBE1Q8IWY4 988 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 DDIASQ8IXT1 998 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 AADATQ8N5Z0 425 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 OR14C36Q8NHC7 312 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 DNAJB8Q8NHS0 232 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 GIMAP7Q8NHV1 300 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 METTL6Q8TCB7 284 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 HM13Q8TCT9 377 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 AGR3Q8TD06 166 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 TWIST2Q8WVJ9 160 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 APOBEC4Q8WW27 367 aaKnown RBP8.08□□□□□ -1.12
CHD4-208ENST00000540960 STARD8Q92502 1023 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 UBE2E3Q969T4 207 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 PMEPA1Q969W9 287 aa8.08□□□□□ -1.12
CHD4-208ENST00000540960 ROPN1LQ96C74 230 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms