RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 EFCAB11Q9BUY7 163 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 EHD1Q9H4M9 534 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 IKZF5Q9H5V7 419 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 BRF2Q9HAW0 419 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 TMEM45AQ9NWC5 275 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC25A37Q9NYZ2 338 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 VAPAQ9P0L0 249 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 SUCOQ9UBS9 1254 aaKnown RBP11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 FBXL21Q9UKT6 434 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 EXO1Q9UQ84 846 aaKnown RBP11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 ERVK-11Q9UQG0 969 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 HS3ST3A1Q9Y663 406 aa11.8□□□□□ -0.52
AP003559.1-201ENST00000540906 PRAMEF26H0Y7S4 382 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 H7BY64 318 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PRICKLE3O43900 615 aaPredicted RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ANP32DO95626 131 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 STATHP02808 62 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PGRP06401 933 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PRPS2P11908 318 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 CDKN2CP42773 168 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 RAB28P51157 221 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 WNT3P56703 355 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 MTPNP58546 118 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 CYP4F2P78329 520 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 MRPS22P82650 360 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC34A1Q06495 639 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 TRIM25Q14258 630 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 LRRC32Q14392 662 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 UGT8Q16880 541 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SAMD4BQ5PRF9 694 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 NANOGP8Q6NSW7 305 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 CYP2R1Q6VVX0 501 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ADHFE1Q8IWW8 467 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SYNPOQ8N3V7 929 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 FBXL6Q8N531 539 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 OR7A2PQ8NGA2 310 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 OR2A1Q8NGT9 310 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 CDC26Q8NHZ8 85 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SNX19Q92543 992 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PRAP1Q96NZ9 151 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 HOPXQ9BPY8 73 aaPredicted RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 HAUS8Q9BT25 410 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PIF1Q9H611 641 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 NANOGQ9H9S0 305 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 WASH6PQ9NQA3 447 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SERHLQ9NQF3 203 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 GID8Q9NWU2 228 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 KLHL20Q9Y2M5 609 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ARHGEF17Q96PE2 2063 aaPredicted RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 TNFRSF10CO14798 259 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 LCMT2O60294 686 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 KCNJ13O60928 360 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 BAG2O95816 211 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 LMNAP02545 664 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 WNT1P04628 370 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 HSD3B1P14060 373 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 HOXB9P17482 250 aaPredicted RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 EFNA1P20827 205 aaPredicted RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 HSD3B2P26439 372 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 HTR1BP28222 390 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SLC19A1P41440 591 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 GSK3BP49841 420 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 YPEL5P62699 121 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 REEP5Q00765 189 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ZNF33BQ06732 778 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 FOXM1Q08050 763 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ACSM2AQ08AH3 577 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 FZD2Q14332 565 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 RBBP5Q15291 538 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ACSM2BQ68CK6 577 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ABRAXAS1Q6UWZ7 409 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SYT12Q8IV01 421 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 KBTBD2Q8IY47 623 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 C10orf111Q8N326 155 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ABHD11Q8NFV4 315 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 OR2L8Q8NGY9 312 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 SH3KBP1Q96B97 665 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ASB9Q96DX5 294 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 ZBTB18Q99592 522 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 AICDAQ9GZX7 198 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 PAIP1Q9H074 479 aaKnown RBP11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 TBC1D17Q9HA65 648 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 GPR27Q9NS67 375 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 WNT16Q9UBV4 365 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 EGFL7Q9UHF1 273 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 TMED5Q9Y3A6 229 aa11.79□□□□□ -0.52
AP003559.1-201ENST00000540906 GON4LQ3T8J9 2241 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 EML5Q05BV3 1969 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 TDRD6O60522 2096 aaKnown RBP11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 TRBV5-3A0A0A0MS03 114 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 ARHGAP10A1A4S6 786 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 FOXE1O00358 373 aaPredicted RBP11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 THEGLP0DJG4 465 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 NCK1P16333 377 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 PTPN6P29350 595 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 CSNK1G2P78368 415 aa11.78□□□□□ -0.52
AP003559.1-201ENST00000540906 LIPEQ05469 1076 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms