RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PROSER1	Q86XN7	944 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GATAD2A	Q86YP4	633 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DCP2	Q8IU60	420 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MICU2	Q8IYU8	434 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	STK40	Q8N2I9	435 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TBC1D19	Q8N5T2	526 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CELF2-AS1	Q8N7Q2	184 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GOLM1	Q8NBJ4	401 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR13C4	Q8NGS5	318 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM162A	Q96A26	154 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AURKB	Q96GD4	344 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF486	Q96H40	463 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZSWIM3	Q96MP5	696 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OSBPL10	Q9BXB5	764 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DSN1	Q9H410	356 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RNF167	Q9H6Y7	350 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RMND5A	Q9H871	391 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C8orf4	Q9NR00	106 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	THAP10	Q9P2Z0	257 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	INTS6	Q9UL03	887 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TANC1	Q9C0D5	1861 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCDC162P	A2VCL2	907 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NPEPPSL1	A6NEC2	478 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BCKDK	O14874	412 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAD51B	O15315	384 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	YKT6	O15498	198 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPN2	P04844	631 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ITIH1	P19827	911 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MSH3	P20585	1137 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EPHA2	P29317	976 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LTBR	P36941	435 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MASP1	P48740	699 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARL4D	P49703	201 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPL6	Q02878	288 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VAC14	Q08AM6	782 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC10A7	Q0GE19	358 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LCP2	Q13094	533 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF234	Q14588	700 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CST6	Q15828	149 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF805	Q5CZA5	627 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C6orf136	Q5SQH8	315 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANKS6	Q68DC2	871 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NEK5	Q6P3R8	708 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DLEU7	Q6UYE1	221 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DET1	Q7L5Y6	550 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	B3GNT8	Q7Z7M8	397 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LYSMD2	Q8IV50	215 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR52B6	Q8NGF0	335 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DYNC2LI1	Q8TCX1	351 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATL1	Q8WXF7	558 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PYCR2	Q96C36	320 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LGALS12	Q96DT0	336 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC47A1	Q96FL8	570 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VMP1	Q96GC9	406 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DMRTB1	Q96MA1	342 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF583	Q96ND8	569 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SMIM14	Q96QK8	99 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC22A12	Q96S37	553 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CGREF1	Q99674	301 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZBTB20	Q9HC78	741 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NEK6	Q9HC98	313 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DDX28	Q9NUL7	540 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VAPA	Q9P0L0	249 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FBXO4	Q9UKT5	387 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IFT52	Q9Y366	437 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCDHB14	Q9Y5E9	798 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCDHGA10	Q9Y5H3	936 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAI2	Q9Y5P3	530 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MYO1G	B0I1T2	1018 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BTN3A1	O00481	513 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GABARAP	O95166	117 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IGLV3-27	P01718	113 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GSN	P06396	782 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ENO2	P09104	434 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD36	P16671	472 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF37A	P17032	561 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SERPINB10	P48595	397 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CLK1	P49759	484 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DUSP3	P51452	185 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPS21	P63220	83 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FOXM1	Q08050	763 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CLCA4	Q14CN2	919 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CRY1	Q16526	586 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM214A	Q32MH5	1076 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZRANB3	Q5FWF4	1079 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LYSMD4	Q5XG99	296 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTRHD1	Q6GMV3	140 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LINGO4	Q6UY18	593 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GCNT7	Q6ZNI0	430 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		Q6ZVU0	165 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	USP30	Q70CQ3	517 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GLT6D1	Q7Z4J2	308 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GALNT10	Q86SR1	603 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OOSP2	Q86WS3	158 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BEND7	Q8N7W2	519 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DTWD2	Q8NBA8	298 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF540	Q8NDQ6	660 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR2T12	Q8NG77	320 aa		5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms