RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 EFHD2Q96C19 240 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 MAGEB10Q96LZ2 347 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 DPH2Q9BQC3 489 aaPredicted RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 COPS4Q9BT78 406 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 EBPLQ9BY08 206 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 PLCXD1Q9NUJ7 323 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 FAM120CQ9NX05 1096 aaKnown RBP11.9□□□□□ -0.5
NPC1-202ENST00000540608 PIKFYVEQ9Y2I7 2098 aa11.9□□□□□ -0.5
NPC1-202ENST00000540608 METTL15A6NJ78 407 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 SAGE2PA6NJ88 616 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 M0R082 166 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 PRAMEF4O60810 478 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 CPSF4O95639 269 aaKnown RBP11.9□□□□□ -0.51
NPC1-202ENST00000540608 LATS1O95835 1130 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 B4GALNT1Q00973 533 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 ELP6Q0PNE2 266 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 CDH18Q13634 790 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 BCL2A1Q16548 175 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 ZNF181Q2M3W8 571 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 PRAMEF9Q5VWM5 478 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 CYP2U1Q7Z449 544 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 TSPAN33Q86UF1 283 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 LYSMD2Q8IV50 215 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 APCDD1Q8J025 514 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 CRIPAKQ8N1N5 446 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 ERLEC1Q96DZ1 483 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 COPS8Q99627 209 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 SPATA9Q9BWV2 254 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 PSORS1C1Q9UIG5 152 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 RNF6Q9Y252 685 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 SLC22A14Q9Y267 594 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 PCDHB11Q9Y5F2 797 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 PCDHGB3Q9Y5G1 929 aa11.9□□□□□ -0.51
NPC1-202ENST00000540608 PABPC1P11940 636 aaKnown RBP11.89□□□□□ -0.51
NPC1-202ENST00000540608 COX7A2P14406 83 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 SERPINB1P30740 379 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 KCNJ10P78508 379 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 SYT16Q17RD7 645 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 P3H2Q8IVL5 708 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 MYDGFQ969H8 173 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 TPD52L3Q96J77 140 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 LYSMD1Q96S90 227 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 C2orf49Q9BVC5 232 aaPredicted RBP11.89□□□□□ -0.51
NPC1-202ENST00000540608 VN1R3Q9BXE9 311 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 ABCG8Q9H221 673 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 ZBTB20Q9HC78 741 aaPredicted RBP11.89□□□□□ -0.51
NPC1-202ENST00000540608 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 SLCO3A1Q9UIG8 710 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 ZNF229Q9UJW7 825 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 ABT1Q9ULW3 272 aaKnown RBP11.89□□□□□ -0.51
NPC1-202ENST00000540608 A3GALT2U3KPV4 340 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 AGAP5A6NIR3 686 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 GFRA2O00451 464 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 NUAK1O60285 661 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 JUPP14923 745 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 C21orf58P58505 322 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 SELENBP1Q13228 472 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 PLD1Q13393 1074 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 PRSS36Q5K4E3 855 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 CRTC1Q6UUV9 634 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 ZSWIM9Q86XI8 627 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 CLECL1Q8IZS7 167 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 BHMTQ93088 406 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 TMEM175Q9BSA9 504 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 CEP44Q9C0F1 390 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 TPT1P8Q9HAU6 139 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 ABCB10Q9NRK6 738 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.89□□□□□ -0.51
NPC1-202ENST00000540608 AP1M2Q9Y6Q5 423 aa11.89□□□□□ -0.51
NPC1-202ENST00000540608 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 NPIPB15A6NHN6 443 aaPredicted RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 YY2O15391 372 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 SUV39H1O43463 412 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 VIPP01282 170 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 OR56A5P0C7T3 313 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 C21orf33P30042 268 aaPredicted RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 CTSKP43235 329 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 PXNP49023 591 aaPredicted RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 ZNF33BQ06732 778 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 HSPA14Q0VDF9 509 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 CSTF3Q12996 717 aaKnown RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 CHIT1Q13231 466 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 TBCEQ15813 527 aaPredicted RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 KCNJ8Q15842 424 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 LHX8Q68G74 356 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 TMEM53Q6P2H8 277 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 USP43Q70EL4 1123 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 RNF175Q8N4F7 328 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 SKA2Q8WVK7 121 aaPredicted RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 P2RY13Q9BPV8 354 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 FKBP14Q9NWM8 211 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 PADI2Q9Y2J8 665 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 LAMA2P24043 3122 aaKnown RBP11.88□□□□□ -0.51
NPC1-202ENST00000540608 UPK3BL1B0FP48 263 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 UPK3BL2E5RIL1 263 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 GFYI3L273 518 aa11.88□□□□□ -0.51
NPC1-202ENST00000540608 SLC16A5O15375 505 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms