RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 DIO3P55073 304 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 C19orf57Q0VDD7 668 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 GRB7Q14451 532 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ACAP2Q15057 778 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 LYPD8Q6UX82 237 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 KIF18BQ86Y91 864 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 C1orf210Q8IVY1 113 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 OR10A6Q8NH74 314 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 SH3RF2Q8TEC5 729 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TCEAL4Q96EI5 215 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 REXO5Q96IC2 774 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 REEP1Q9H902 201 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZNF556Q9HAH1 456 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 OPTCQ9UBM4 332 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 AASSQ9UDR5 926 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZMAT5Q9UDW3 170 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZNF222Q9UK12 451 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 SAMHD1Q9Y3Z3 626 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 CNOT1A5YKK6 2376 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZFHX2Q9C0A1 2572 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZCWPW2A0A1B0GU75 182 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZNF487B1APH4 448 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 PRKAR1AP10644 381 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TNNI3P19429 210 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 CA5AP35218 305 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 RECQLP46063 649 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 AP2S1P53680 142 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 GALNT1Q10472 559 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 MAPKAPK3Q16644 382 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 FAM78AQ5JUQ0 283 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ARHGAP17Q68EM7 881 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 ARSKQ6UWY0 536 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TPGS1Q6ZTW0 290 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 TRMT11Q7Z4G4 463 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 SUSD6Q92537 303 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 KHSRPQ92945 711 aaKnown RBP eCLIP8.44□□□□□ -1.06
DDB1-217ENST00000540166 FUBP3Q96I24 572 aaKnown RBP eCLIP8.44□□□□□ -1.06
DDB1-217ENST00000540166 ITCHQ96J02 903 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 P2RY13Q9BPV8 354 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 DUSP16Q9BY84 665 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 SLIRPQ9GZT3 109 aaKnown RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 ZNF304Q9HCX3 659 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 LTB4R2Q9NPC1 389 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 PDP1Q9P0J1 537 aaPredicted RBP8.44□□□□□ -1.06
DDB1-217ENST00000540166 MAPRE3Q9UPY8 281 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 BAIAP2Q9UQB8 552 aa8.44□□□□□ -1.06
DDB1-217ENST00000540166 NUP205Q92621 2012 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 MYO10Q9HD67 2058 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 METTL15A6NJ78 407 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FAM72CH0Y354 149 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 H3BUI4 141 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 CFIP05156 583 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 ITGB6P18564 788 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 ATF6P18850 670 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 TGFBR1P36897 503 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 DMWDQ09019 674 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 TAF10Q12962 218 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FAM72AQ5TYM5 149 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FAM72DQ6L9T8 149 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 EIF3MQ7L2H7 374 aaKnown RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 PRSS48Q7RTY5 328 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 LDB1Q86U70 411 aaPredicted RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 FAM72BQ86X60 149 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 SETD6Q8TBK2 473 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 BTN2A3PQ96KV6 586 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 ACOT13Q9NPJ3 140 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 CASS4Q9NQ75 786 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 INTS7Q9NVH2 962 aaKnown RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 VWA7Q9Y334 891 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FABP12A6NFH5 140 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 TRIM64A6NGJ6 449 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 GALR2O43603 387 aaPredicted RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 PLOD3O60568 738 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 ECI2O75521 394 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 OAZ2O95190 189 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 PIGAP37287 484 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 EFEMP1Q12805 493 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FAPQ12884 760 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 RUNX3Q13761 415 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 GALEQ14376 348 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 CTU2Q2VPK5 515 aaKnown RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 FUNDC1Q8IVP5 155 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 HDDC3Q8N4P3 179 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 CNPPD1Q9BV87 410 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 SMG9Q9H0W8 520 aaKnown RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 S1PR5Q9H228 398 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 SP110Q9HB58 689 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 NTN4Q9HB63 628 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 SARS2Q9NP81 518 aaKnown RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 RDH8Q9NYR8 311 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 PTGDR2Q9Y5Y4 395 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 TRIM64BA6NI03 449 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 CLDN24A6NM45 220 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 WBP4O75554 376 aaKnown RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 C1RP00736 705 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 HAPLN1P10915 354 aaPredicted RBP8.43□□□□□ -1.06
DDB1-217ENST00000540166 HLA-DPA1P20036 260 aa8.43□□□□□ -1.06
DDB1-217ENST00000540166 UFM1P61960 85 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms