RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RPL26P61254 145 aaKnown RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM240Q5SV17 173 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 C9orf64Q5T6V5 341 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 LYPLAL1Q5VWZ2 237 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 OR2T5Q6IEZ7 315 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TNFAIP8L2Q6P589 184 aaPredicted RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 LILRA6Q6PI73 481 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 USP30Q70CQ3 517 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CYP2U1Q7Z449 544 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 FAM20CQ8IXL6 584 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CFAP206Q8IYR0 622 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 OR2T29Q8NH02 315 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CNIH3Q8TBE1 160 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TEX47Q8TBZ9 253 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SP140LQ9H930 580 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TBC1D14Q9P2M4 693 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 DPP7Q9UHL4 492 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF232Q9UNY5 417 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 RWDD3Q9Y3V2 267 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 A0A0G2JN53 185 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 PLK4O00444 970 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 GPR39O43194 453 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ABCB7O75027 752 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 OLFM2O95897 454 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 GBAP04062 536 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TYRP14679 529 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SSR2P43308 183 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 DNAJB13P59910 316 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ABATP80404 500 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 UNC50Q53HI1 259 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 RBM48Q5RL73 367 aaKnown RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CAPN13Q6MZZ7 669 aaPredicted RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CES5AQ6NT32 575 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 UGT2A3Q6UWM9 527 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 PRR23BQ6ZRT6 265 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ISCA2Q86U28 154 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 OR5AK3PQ8NH89 298 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 UBE2E3Q969T4 207 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 KIAA1191Q96A73 305 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 C11orf24Q96F05 449 aaPredicted RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 QRFPRQ96P65 431 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF607Q96SK3 696 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 CCDC3Q9BQI4 270 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 DUSP26Q9BV47 211 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 SYNDIG1Q9H7V2 258 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TBC1D17Q9HA65 648 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TRPV5Q9NQA5 729 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TVP23BQ9NYZ1 205 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 HEMK1Q9Y5R4 338 aaPredicted RBP9.69□□□□□ -0.86
TRAF1-202ENST00000540010 DOCK4Q8N1I0 1966 aa9.69□□□□□ -0.86
TRAF1-202ENST00000540010 TANC1Q9C0D5 1861 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SLC22A1O15245 554 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ERN1O75460 977 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 UGT2B17O75795 530 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 BMP10O95393 424 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 CD1DP15813 335 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 CCR2P41597 374 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 OR4D2P58180 307 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SH3BP2P78314 561 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 HTRA4P83105 476 aaPredicted RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SCN1BQ07699 218 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 HSPB3Q12988 150 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SGCGQ13326 291 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 LY6G5CQ5SRR4 150 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 MPP7Q5T2T1 576 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM236Q5W0B7 351 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SDE2Q6IQ49 451 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 MZT2AQ6P582 158 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF773Q6PK81 442 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 UBXN10Q96LJ8 280 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 FAM83DQ9H4H8 585 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZIM2Q9NZV7 527 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 MAPRE3Q9UPY8 281 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 RNF11Q9Y3C5 154 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SESN1Q9Y6P5 492 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 RP1L1Q8IWN7 2480 aaPredicted RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 A0A0J9YVX5 310 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 BTN3A3O00478 584 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 NME4O00746 187 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 AP3D1O14617 1153 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 GADD45GO95257 159 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 CD160O95971 181 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 C8BP07358 591 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 DDX6P26196 483 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ACADVLP49748 655 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 TGM3Q08188 693 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 DCST1Q5T197 706 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 FAM91A1Q658Y4 838 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 RNF44Q7L0R7 432 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 ZBTB8BQ8NAP8 495 aaPredicted RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 FNDC8Q8TC99 324 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 SPPL3Q8TCT6 385 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 IRF7Q92985 503 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 RAD51AP1Q96B01 352 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 PTERQ96BW5 349 aa9.68□□□□□ -0.86
TRAF1-202ENST00000540010 TEFMQ96QE5 360 aaKnown RBP9.68□□□□□ -0.86
TRAF1-202ENST00000540010 MCUBQ9NWR8 336 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms