RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PPP2R2AP63151 447 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 OC90Q02509 493 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 RELAQ04206 551 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 TRIM14Q14142 442 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 SEMA3AQ14563 771 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 EXT1Q16394 746 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 FASTKD1Q53R41 847 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 RNFT1Q5M7Z0 435 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 TMEM211Q6ICI0 200 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 CEP128Q6ZU80 1094 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 LANCL3Q6ZV70 420 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 ZNF534Q76KX8 674 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 LINC00523Q86TU6 105 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 TMEM200AQ86VY9 491 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 DMRTC2Q8IXT2 367 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 TAB3Q8N5C8 712 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 OR6P1Q8NGX9 317 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 SKA2Q8WVK7 121 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 RERGQ96A58 199 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 FOPNLQ96NB1 174 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 PANX3Q96QZ0 392 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 OLFM1Q99784 485 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 ACAT2Q9BWD1 397 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 MRPS30Q9NP92 439 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 MMP25Q9NPA2 562 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 ABHD10Q9NUJ1 306 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 UTP6Q9NYH9 597 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 KCNN3Q9UGI6 736 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 SLC2A6Q9UGQ3 507 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 RIMKLBQ9ULI2 386 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 ACANP16112 2415 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
CLSTN3-209ENST00000539982 HCFC1P51610 2035 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 IGKV1-8A0A0C4DH67 115 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 A0A0U1RQJ8 604 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 NKX2-6A6NCS4 301 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 GABRR3A8MPY1 467 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 H0YIG0 161 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 PRMT5O14744 637 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 MAN1A2O60476 641 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 TOXO94900 526 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 TJP3O95049 919 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 TPM3P06753 285 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 HOXD4P09016 255 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 DRD2P14416 443 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 ZNF24P17028 368 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 CHRNB4P30926 498 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 PTGS2P35354 604 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 AGTR2P50052 363 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 ACVR1Q04771 509 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 PRDX1Q06830 199 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 TFF3Q07654 80 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 PTK6Q13882 451 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 MAPKAPK3Q16644 382 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 NDUFA9Q16795 377 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 P3H1Q32P28 736 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 MINDY4Q4G0A6 757 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 TSTD2Q5T7W7 516 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 MFSD4BQ5TF39 518 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 PTRHD1Q6GMV3 140 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 ZNF425Q6IV72 752 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 C11orf63Q6NUN7 778 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 ANKRD37Q7Z713 158 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 MARVELD2Q8N4S9 558 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 SLC5A8Q8N695 610 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 FAM71DQ8N9W8 422 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 OR52K1Q8NGK4 314 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 FAM57AQ8TBR7 257 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 SMPDL3AQ92484 453 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 NRGNQ92686 78 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 NINJ1Q92982 152 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 UCK2Q9BZX2 261 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 LRFN1Q9P244 771 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 ANAPC5Q9UJX4 755 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 PCDHA3Q9Y5H8 950 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 HRH3Q9Y5N1 445 aa10.96□□□□□ -0.65
CLSTN3-209ENST00000539982 ZNF469Q96JG9 3925 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 DNHD1Q96M86 4753 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 INTS1Q8N201 2190 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 NME2P1O60361 137 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 MATN4O95460 622 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 GAS8O95995 478 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 TPOP07202 933 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 ERGP11308 486 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 EZRP15311 586 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 FOSL1P15407 271 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 NME2P22392 152 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 ADRA1DP25100 572 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 MSX1P28360 303 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 PTGER1P34995 402 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 RPA3P35244 121 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 MAGEA1P43355 309 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 PRAMEP78395 509 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 FOLH1Q04609 750 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 CDH17Q12864 832 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 ANKRD20A4Q4UJ75 823 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 AARS2Q5JTZ9 985 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms