RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 TPT1P8Q9HAU6 139 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 SGK2Q9HBY8 427 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 IL1RAPQ9NPH3 570 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 NINQ8N4C6 2090 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 GFYI3L273 518 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 EPN2O95208 641 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 FABP3P05413 133 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 OCM2P0CE71 109 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 OCMP0CE72 109 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 PRPS2P11908 318 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 JUPP14923 745 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 CYP2A7P20853 494 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 NUDT6P53370 316 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 MOGQ16653 247 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 NAGSQ8N159 534 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 RASGEF1AQ8N9B8 481 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF540Q8NDQ6 660 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 TESCQ96BS2 214 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 NRBF2Q96F24 287 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 SORBS1Q9BX66 1292 aaKnown RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 EPS8L2Q9H6S3 715 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 POLE4Q9NR33 117 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 RLIMQ9NVW2 624 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
UBE3B-210ENST00000539599 KIF17Q9P2E2 1029 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 VPS29Q9UBQ0 182 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 ENPP5Q9UJA9 477 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 FZD4Q9ULV1 537 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF99A8MXY4 864 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 CCNDBP1O95273 360 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 KRT20P35900 424 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 MAGEA2P43356 314 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 ACSM2AQ08AH3 577 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 ACSM2BQ68CK6 577 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 AGTRAPQ6RW13 159 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 SPRED2Q7Z698 418 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 TMPRSS11BQ86T26 416 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 ZNF554Q86TJ5 538 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 SLCO6A1Q86UG4 719 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 HIPK1Q86Z02 1210 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 WDR20Q8TBZ3 569 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 CIDECQ96AQ7 238 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 SPNS1Q9H2V7 528 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 TRIM39Q9HCM9 518 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 SPG21Q9NZD8 308 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 HS3ST2Q9Y278 367 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 PRKAB1Q9Y478 270 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 PMF1-BGLAPU3KQ54 211 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 TRAV19A0A0A6YYK7 116 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 J3KTA2 159 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 K7ESM1 405 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 PCDHGA12O60330 932 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 GCM2O75603 506 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 LATS1O95835 1130 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 C8GP07360 202 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 CBSLP0DN79 551 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 POU2F1P14859 743 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 CBSP35520 551 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 RPS13P62277 151 aaKnown RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 IFITM3Q01628 133 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 TEAD2Q15562 447 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 SOWAHCQ53LP3 525 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 PRSS36Q5K4E3 855 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 TSEN54Q7Z6J9 526 aaKnown RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 NLGN4XQ8N0W4 816 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 NEIL2Q969S2 332 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
UBE3B-210ENST00000539599 STOX2Q9P2F5 926 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBE3B-210ENST00000539599 GNG14A0A1W2PPG7 69 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 TMEM229AB2RXF0 380 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 CFAP99D6REC4 459 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 SLC16A6O15403 523 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 ANXA4P09525 319 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 CTSAP10619 480 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 PABPC1P11940 636 aaKnown RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 ETFAP13804 333 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 TYRP14679 529 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 CSF2RAP15509 400 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 C21orf33P30042 268 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-210ENST00000539599 MAPK8P45983 427 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 PPP3CCP48454 512 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 CSNK1DP48730 415 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 SYTL3Q4VX76 610 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 LY6G5CQ5SRR4 150 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 EGFLAMQ63HQ2 1017 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 KDM4DQ6B0I6 523 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 ADIPOR2Q86V24 386 aa13.57□□□□□ -0.24
UBE3B-210ENST00000539599 CROCCP3Q8IVE0 287 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms