RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	PRAP1	Q96NZ9	151 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SPSB2	Q99619	263 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CAPS2	Q9BXY5	557 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	DRC3	Q9H069	523 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CLK4	Q9HAZ1	481 aa	Known RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	C14orf105	Q9NVL8	296 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	C5AR2	Q9P296	337 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MTRF1L	Q9UGC7	380 aa	Known RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RUVBL1	Q9Y265	456 aa	Known RBP	11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MAP4K5	Q9Y4K4	846 aa		11.73	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CNTRL	Q7Z7A1	2325 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NUP210L	Q5VU65	1888 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CXorf49	A8MYA2	514 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	AGPS	O00116	658 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	HAT1	O14929	419 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CNOT3	O75175	753 aa	Known RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NSA2	O95478	260 aa	Known RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	UMOD	P07911	640 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PLA2G2A	P14555	144 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GSTM2	P28161	218 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CRABP2	P29373	138 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PHB	P35232	272 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	AHR	P35869	848 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GGT5	P36269	586 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CCR8	P51685	355 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NFKB2	Q00653	900 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	OCA2	Q04671	838 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	KLRB1	Q12918	225 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TSTA3	Q13630	321 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	COL9A2	Q14055	689 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	USP10	Q14694	798 aa	Known RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SLC9A5	Q14940	896 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	KBTBD12	Q3ZCT8	623 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	DCAF10	Q5QP82	559 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CEP97	Q8IW35	865 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CEP112	Q8N8E3	955 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RNF31	Q96EP0	1072 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SMAD5	Q99717	465 aa	Known RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SLC25A23	Q9BV35	468 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ATG10	Q9H0Y0	220 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PELI2	Q9HAT8	420 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	COPG2	Q9UBF2	871 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CTNNAL1	Q9UBT7	734 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MTO1	Q9Y2Z2	717 aa	Known RBP	11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ZNF451	Q9Y4E5	1061 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SLC22A7	Q9Y694	548 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	KCNE2	Q9Y6J6	123 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MYO18B	Q8IUG5	2567 aa		11.72	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NBAS	A2RRP1	2371 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TRBC2	A0A5B9	178 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828		J3QKU1	62 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	NRP2	O60462	931 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	IPO13	O94829	963 aa	Known RBP	11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	EIF2S1	P05198	315 aa	Known RBP	11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	IL10	P22301	178 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CASR	P41180	1078 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	RAB10	P61026	200 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	SKP1	P63208	163 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	PWP1	Q13610	501 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	VN1R4	Q7Z5H5	301 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ADCK2	Q7Z695	626 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MFSD9	Q8NBP5	474 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CLEC1A	Q8NC01	280 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	STT3B	Q8TCJ2	826 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	FBF1	Q8TES7	1133 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	ANKRD49	Q8WVL7	239 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	KIAA1191	Q96A73	305 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	MIEF2	Q96C03	454 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TRIM44	Q96DX7	344 aa	Predicted RBP	11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CABS1	Q96KC9	395 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CYTH2	Q99418	400 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	TRIM55	Q9BYV6	548 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	EHD1	Q9H4M9	534 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	CNOT10	Q9H9A5	744 aa	Known RBP	11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	P4HTM	Q9NXG6	502 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	GPRC5B	Q9NZH0	403 aa		11.71	□□□□□ -0.53
CLTCL1-205	ENST00000538828	BSN	Q9UPA5	3926 aa		11.71	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ARGFX	A6NJG6	315 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	FOXS1	O43638	330 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ZGLP1	P0C6A0	271 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC35G6	P0C7Q6	338 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	FBL	P22087	321 aa	Known RBP	11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CXCR2	P25025	360 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	VARS	P26640	1264 aa	Known RBP	11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	AVPR1B	P47901	424 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC6A12	P48065	614 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CSRP3	P50461	194 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	PGD	P52209	483 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	SLC7A5	Q01650	507 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	AIMP2	Q13155	320 aa	Known RBP	11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	ATP1A4	Q13733	1029 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	CSHL1	Q14406	222 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	MYBPC3	Q14896	1274 aa		11.7	□□□□□ -0.54
CLTCL1-205	ENST00000538828	TGFBI	Q15582	683 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 87 ms