RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 FAM20BO75063 409 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 NADKO95544 446 aaPredicted RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 GBAP04062 536 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 URODP06132 367 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 ACPPP15309 386 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 FPR1P21462 350 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 ACVR2AP27037 513 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 NAE1Q13564 534 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CLCA4Q14CN2 919 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 MAD2L1BPQ15013 274 aaPredicted RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CDKL4Q5MAI5 379 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 AHSA2Q719I0 299 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 THOC6Q86W42 341 aaKnown RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 SLC39A11Q8N1S5 342 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 TCAIMQ8N3R3 496 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 WDR20Q8TBZ3 569 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 SORCS1Q8WY21 1168 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 MRPS31Q92665 395 aaKnown RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 LMLNQ96KR4 655 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 OR4K3Q96R72 315 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 AMBNQ9NP70 447 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CHD7Q9P2D1 2997 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 NDRG4Q9ULP0 352 aaKnown RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 FZD4Q9ULV1 537 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 UNC80Q8N2C7 3258 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 MYO7AQ13402 2215 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CLDN25C9JDP6 229 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 M0R3G1 203 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 WBP4O75554 376 aaKnown RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 VIPP01282 170 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 OPN1SWP03999 348 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 BDKRB1P46663 353 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 TRPC1P48995 793 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 RPP38P78345 283 aaKnown RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 OCA2Q04671 838 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 GAB1Q13480 694 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CYP27C1Q4G0S4 372 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 PAGE2BQ5JRK9 111 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 CBLL1Q75N03 491 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 C1orf52Q8N6N3 182 aaKnown RBP11.56□□□□□ -0.56
CPNE8-203ENST00000538596 YIPF6Q96EC8 236 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 PCDHGB1Q9Y5G3 927 aa11.56□□□□□ -0.56
CPNE8-203ENST00000538596 TMEM247A6NEH6 219 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 JUNDP17535 347 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 HPCAL1P37235 193 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 CD97P48960 835 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 RAE1P78406 368 aaKnown RBP11.55□□□□□ -0.56
CPNE8-203ENST00000538596 MVKQ03426 396 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 SRSF11Q05519 484 aaKnown RBP11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ACSM2AQ08AH3 577 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 KEAP1Q14145 624 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ACSM2BQ68CK6 577 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 EIF3MQ7L2H7 374 aaKnown RBP11.55□□□□□ -0.56
CPNE8-203ENST00000538596 GPR155Q7Z3F1 870 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 P2RY8Q86VZ1 359 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 APH1BQ8WW43 257 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF558Q96NG5 402 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 KCNC2Q96PR1 638 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ALPK1Q96QP1 1244 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 C19orf43Q9BQ61 176 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 NEURL2Q9BR09 285 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 SLC46A2Q9BY10 475 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 REEP1Q9H902 201 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ACOT13Q9NPJ3 140 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 AKIP1Q9NQ31 210 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 KLHL42Q9P2K6 505 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 DAPK2Q9UIK4 370 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 RPS6KA6Q9UK32 745 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 HS3ST2Q9Y278 367 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 TPRKBQ9Y3C4 175 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 PPIL1Q9Y3C6 166 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 COL4A6Q14031 1691 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 FADS2P1A8MWK0 482 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 TMEM229AB2RXF0 380 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ATP6V1G1O75348 118 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 JRKO75564 520 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 MPC1LP0DKB6 136 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 HOXD10P28358 340 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 CTSCP53634 463 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 PTPN5P54829 565 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ACOX1Q15067 660 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 KIAA1614Q5VZ46 1190 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ANGPTL8Q6UXH0 198 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 ZNF852Q6ZMS4 543 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 NAGSQ8N159 534 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 CPXM2Q8N436 756 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 C7orf34Q96L11 122 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 SGK2Q9HBY8 427 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 PALMDQ9NP74 551 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 RAPGEFL1Q9UHV5 662 aa11.55□□□□□ -0.56
CPNE8-203ENST00000538596 TGM5O43548 720 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms