RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 DHRS12A0PJE2 317 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 SOX1O00570 391 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ABCB1P08183 1280 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 COX7A2P14406 83 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 GABRG2P18507 467 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 PXNP49023 591 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 PPP1R8Q12972 351 aaKnown RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 TTC23LQ6PF05 361 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 NXPE4Q6UWF7 544 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ADCK2Q7Z695 626 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 OR4K1Q8NGD4 311 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 COQ10BQ9H8M1 238 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ACTR3BQ9P1U1 418 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 MYOCOSA0A1B0GUC4 107 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 IL6P05231 212 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 CYP4F3Q08477 520 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 C16orf72Q14CZ0 275 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 C6orf52Q5T4I8 152 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 SLC30A9Q6PML9 568 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 GPR180Q86V85 440 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 GALNT13Q8IUC8 556 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ADGRG5Q8IZF4 528 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 DEFB119Q8N690 84 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ANKRD53Q8N9V6 530 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 OR1E3Q8WZA6 343 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 EME1Q96AY2 570 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 NECTIN4Q96NY8 510 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 C6orf203Q9P0P8 240 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 SH3BP4Q9P0V3 963 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 VPS4AQ9UN37 437 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 EXO1Q9UQ84 846 aaKnown RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 SPTBP11277 2137 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 A0A1W2PPV9 198 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 GABRR3A8MPY1 467 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 UGDHO60701 494 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 TBX6O95947 436 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 SLC7A1P30825 629 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 BMP8BP34820 402 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 WNT3P56703 355 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 PRSS53Q2L4Q9 553 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ZNF385BQ569K4 471 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ZFP1Q6P2D0 407 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 OXR1Q8N573 874 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 FBXO30Q8TB52 745 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 FAM3CQ92520 227 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 C11orf24Q96F05 449 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 BMFQ96LC9 184 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-205ENST00000538545 ITM2CQ9NQX7 267 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 TBC1D29Q9UFV1 150 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 LRCH1Q9Y2L9 728 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 DGKBQ9Y6T7 804 aa13.59□□□□□ -0.23
ACTN1-205ENST00000538545 CFAP54Q96N23 3096 aa13.58□□□□□ -0.23
ACTN1-205ENST00000538545 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.23
ACTN1-205ENST00000538545 TCRBV5S2A0A599 114 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 MBTPS2O43462 519 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 SERPIND1P05546 499 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 KLK1P06870 262 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 COL4A2P08572 1712 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 PRPS2P11908 318 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 NELFEP18615 380 aaKnown RBP13.58□□□□□ -0.24
ACTN1-205ENST00000538545 KELP23276 732 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 PTPN6P29350 595 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 FOXM1Q08050 763 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 CSTF3Q12996 717 aaKnown RBP13.58□□□□□ -0.24
ACTN1-205ENST00000538545 CCINQ13939 588 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 RNF165Q6ZSG1 346 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 Q7L0L9 218 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 COMMD6Q7Z4G1 85 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 FBXO15Q8NCQ5 510 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-205ENST00000538545 BIRC7Q96CA5 298 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 TMEM168Q9H0V1 697 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 DMRT3Q9NQL9 472 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 C5AR2Q9P296 337 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 BCAP29Q9UHQ4 241 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 INVSQ9Y283 1065 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 RFXANKO14593 260 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 PCDH7O60245 1069 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 LCMT2O60294 686 aaKnown RBP13.58□□□□□ -0.24
ACTN1-205ENST00000538545 KLHL18O94889 574 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 STAMBPO95630 424 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 DRD1P21728 446 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 KRT33BQ14525 404 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 CAPRIN2Q6IMN6 1127 aaKnown RBP13.58□□□□□ -0.24
ACTN1-205ENST00000538545 LCN8Q6JVE9 175 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 ENPP6Q6UWR7 440 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 UNC5DQ6UXZ4 953 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF621Q6ZSS3 439 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 PATE1Q8WXA2 126 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 PANX1Q96RD7 426 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 ABCG4Q9H172 646 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 C6orf106Q9H6K1 298 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-205ENST00000538545 SYNPO2LQ9H987 977 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 ASIC5Q9NY37 505 aa13.58□□□□□ -0.24
ACTN1-205ENST00000538545 CA14Q9ULX7 337 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms