RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PARS2Q7L3T8 475 aaKnown RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 LPCAT2Q7L5N7 544 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 GPR141Q7Z602 305 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 ZZZ3Q8IYH5 903 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 ZNF420Q8TAQ5 688 aaPredicted RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 FBXO30Q8TB52 745 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 NETO1Q8TDF5 533 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 CYB5D2Q8WUJ1 264 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 FBLIM1Q8WUP2 373 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 DTD2Q96FN9 168 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 PYURFQ96I23 114 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 APOLD1Q96LR9 279 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 ZSWIM3Q96MP5 696 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 PHF12Q96QT6 1004 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 OR4K3Q96R72 315 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 CDCA3Q99618 268 aaPredicted RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 RBM4BQ9BQ04 359 aaKnown RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 TUBA1CQ9BQE3 449 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 CCM2Q9BSQ5 444 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 RBM4Q9BWF3 364 aaKnown RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 ATG10Q9H0Y0 220 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 SOX17Q9H6I2 414 aaPredicted RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 HPS4Q9NQG7 708 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 DDX18Q9NVP1 670 aaKnown RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 THG1LQ9NWX6 298 aaKnown RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 IFT80Q9P2H3 777 aaPredicted RBP8.94□□□□□ -0.98
DDB1-211ENST00000538280 UTS2RQ9UKP6 389 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 CDH7Q9ULB5 785 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 MAPRE3Q9UPY8 281 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 WNT6Q9Y6F9 365 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 AP1M2Q9Y6Q5 423 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 GVINP1Q7Z2Y8 2422 aa8.94□□□□□ -0.98
DDB1-211ENST00000538280 LRRK1Q38SD2 2015 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 RIF1Q5UIP0 2472 aaKnown RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 WDR87Q6ZQQ6 2873 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 KRT87PA6NCN2 255 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CCDC160A6NGH7 325 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 E7EQ34 232 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 G3V2T6 193 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 RFXANKO14593 260 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CLGNO14967 610 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 PI15O43692 258 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 XYLBO75191 536 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CCNDBP1O95273 360 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 B3GALT4O96024 378 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 SERPINA1P01009 418 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CST1P01037 141 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CATP04040 527 aaKnown RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 ITGAMP11215 1152 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 EPCAMP16422 314 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CEBPBP17676 345 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 DCKP27707 260 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CALRP27797 417 aaKnown RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 DCTP40126 519 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 NBL1P41271 181 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 KIR3DL1P43629 444 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 BDKRB1P46663 353 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CCR3P51677 355 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 GABARAPL2P60520 117 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 ESRRGP62508 458 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 GRSF1Q12849 480 aaKnown RBP eCLIP8.93□□□□□ -0.98
DDB1-211ENST00000538280 TMEM115Q12893 351 aaPredicted RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 IL18R1Q13478 541 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 DHCR24Q15392 516 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 GAB4Q2WGN9 574 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CCSMST1Q4G0I0 132 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 ZNF648Q5T619 568 aaPredicted RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 ERICH5Q6P6B1 374 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 ZNF773Q6PK81 442 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 GCNT7Q6ZNI0 430 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 THAP5Q7Z6K1 395 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 TMEM179BQ7Z7N9 219 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 STK32CQ86UX6 486 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 PTOV1Q86YD1 416 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 ZDHHC13Q8IUH4 622 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 SYT12Q8IV01 421 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 TERB1Q8NA31 727 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 CHTF18Q8WVB6 975 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 SORCS1Q8WY21 1168 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 STARD8Q92502 1023 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 HDAC2Q92769 488 aaKnown RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 ZNF707Q96C28 371 aaPredicted RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 EGLN2Q96KS0 407 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 LINC00615Q96LM1 132 aaPredicted RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 MUS81Q96NY9 551 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 PKP4Q99569 1192 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 TBCDQ9BTW9 1192 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 SPATA9Q9BWV2 254 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 AMBRA1Q9C0C7 1298 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 REXO4Q9GZR2 422 aaKnown RBP8.93□□□□□ -0.98
DDB1-211ENST00000538280 CHST8Q9H2A9 424 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 TOR3AQ9H497 397 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 FAM118AQ9NWS6 357 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 TMEM9Q9P0T7 183 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 VPS29Q9UBQ0 182 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 BTNL2Q9UIR0 455 aa8.93□□□□□ -0.98
DDB1-211ENST00000538280 SAMD4AQ9UPU9 718 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms