RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 NUP214P35658 2090 aaPredicted RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 GABRR3A8MPY1 467 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 GNGT2O14610 69 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ANXA4P09525 319 aaPredicted RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 C1GALT1C1LP0DN25 315 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ZNF8P17098 575 aaPredicted RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 FSHRP23945 695 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CDK9P50750 372 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 RPS13P62277 151 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TBPL1P62380 186 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TAP2Q03519 686 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 EPS8Q12929 822 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 DYNC1I2Q13409 638 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 SF1Q15637 639 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 VMACQ2NL98 169 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ZIK1Q3SY52 487 aaPredicted RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CCNYL2Q5T2Q4 361 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ZCCHC8Q6NZY4 707 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ERICH5Q6P6B1 374 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ZNF621Q6ZSS3 439 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TMPRSS11BQ86T26 416 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 LAS2Q8IYD9 372 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ZZZ3Q8IYH5 903 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 OR2L2Q8NH16 312 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 OR5K1Q8NHB7 308 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TBC1D20Q96BZ9 403 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 SAMD11Q96NU1 681 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 MUS81Q96NY9 551 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 RBM4BQ9BQ04 359 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 EFCAB11Q9BUY7 163 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 DUSP26Q9BV47 211 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 RBM4Q9BWF3 364 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 HDAC8Q9BY41 377 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 SMURF2Q9HAU4 748 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 DYRK4Q9NR20 520 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 BTNL2Q9UIR0 455 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 SAMD4AQ9UPU9 718 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 DYRK1BQ9Y463 629 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CHD7Q9P2D1 2997 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 MGAT4DA6NG13 374 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CPSF4O95639 269 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 C1QCP02747 245 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 IDSP22304 550 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TIA1P31483 386 aaKnown RBP eCLIP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 SLC5A2P31639 672 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 DCTP40126 519 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 VAC14Q08AM6 782 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 LAPTM5Q13571 262 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 PLCL1Q15111 1095 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CATSPEREQ5SY80 951 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CPTPQ5TA50 214 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ANXA8L1Q5VT79 327 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TTC23Q5W5X9 447 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 C11orf96Q7Z7L8 435 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 DSG4Q86SJ6 1040 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 PTOV1Q86YD1 416 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CHPFQ8IZ52 775 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CLECL1Q8IZS7 167 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 CPA6Q8N4T0 437 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 RAB7BQ96AH8 199 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 HIC2Q96JB3 615 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 MPP4Q96JB8 637 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ZDHHC5Q9C0B5 715 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 TOR3AQ9H497 397 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 GDE1Q9NZC3 331 aa11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 RSL24D1Q9UHA3 163 aaKnown RBP11.01□□□□□ -0.65
SLC28A1-204ENST00000538177 ALPK3Q96L96 1907 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 GRXCR1A8MXD5 290 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 C1QTNF3-AMACRE9PGA6 284 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 CA3P07451 260 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 EN2P19622 333 aaPredicted RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 HPCAL1P37235 193 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 P2RY2P41231 377 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 HLCSP50747 726 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 ERVK-21P61565 698 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SLBPQ14493 270 aaKnown RBP eCLIP11□□□□□ -0.65
SLC28A1-204ENST00000538177 DUSP6Q16828 381 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 ZBED5Q49AG3 693 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 PAGE2BQ5JRK9 111 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 ANKRD26P1Q6NSI1 321 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 UNC5DQ6UXZ4 953 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 ADAMTSL4Q6UY14 1074 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 TRMT11Q7Z4G4 463 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 TMEM179BQ7Z7N9 219 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 MMAAQ8IVH4 418 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 C7orf61Q8IZ16 206 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 HS3ST5Q8IZT8 346 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 VPS37AQ8NEZ2 397 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 CDC26Q8NHZ8 85 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 PUM2Q8TB72 1066 aaKnown RBP eCLIP11□□□□□ -0.65
SLC28A1-204ENST00000538177 SETD7Q8WTS6 366 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 SUSD6Q92537 303 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SH3KBP1Q96B97 665 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 CXorf40BQ96DE9 158 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 COX14Q96I36 57 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SPATA9Q9BWV2 254 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 OR52A5Q9H2C5 316 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SFXN1Q9H9B4 322 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms