RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ZNF878C9JN71 531 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 RNF13O43567 381 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PSMA1P25786 263 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PEX2P28328 305 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SRYQ05066 204 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SCGB2B2Q4G0G5 96 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 CRB2Q5IJ48 1285 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 KIAA0930Q6ICG6 404 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SLC39A4Q6P5W5 647 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 GJD3Q8N144 294 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 BOLLQ8N9W6 283 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 KLHL6Q8WZ60 621 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SMURF1Q9HCE7 757 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ATXN7L1Q9ULK2 861 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ANKRD66B4E2M5 251 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 GRID2O43424 1007 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 RPL5P46777 297 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PPP1R8Q12972 351 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 DECR1Q16698 335 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 AKAP14Q86UN6 197 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF676Q8N7Q3 588 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 NLGN4YQ8NFZ3 816 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SLC5A11Q8WWX8 675 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PIK3R3Q92569 461 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 IL4I1Q96RQ9 567 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 COQ10BQ9H8M1 238 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 BRF2Q9HAW0 419 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ARFGEF2Q9Y6D5 1785 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SMIM30A4D0T7 59 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 J3QLW9 94 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF19P17023 458 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 UFM1P61960 85 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
LINC00346-201ENST00000538077 DCAF12L1Q5VU92 463 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00346-201ENST00000538077 GALNT10Q86SR1 603 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 SPERTQ8NA61 448 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 OR10G2Q8NGC3 310 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 TNFAIP8L1Q8WVP5 186 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 IGSF21Q96ID5 467 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 RAD9AQ99638 391 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 SMOC2Q9H3U7 446 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 TOR3AQ9H497 397 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PCDHGB5Q9Y5G0 923 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 MAU2Q9Y6X3 613 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 FAM234BA2RU67 622 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 E7EQ34 232 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 MID1O15344 667 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 SCO2O43819 266 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 AGTR2P50052 363 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PRKD1Q15139 912 aaPredicted RBP10.88□□□□□ -0.67
LINC00346-201ENST00000538077 IL22RA1Q8N6P7 574 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 HM13Q8TCT9 377 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PXYLP1Q8TE99 480 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 KIAA1143Q96AT1 154 aaPredicted RBP10.88□□□□□ -0.67
LINC00346-201ENST00000538077 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ORAI3Q9BRQ5 295 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 MEAF6Q9HAF1 191 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 AMBNQ9NP70 447 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ZDHHC2Q9UIJ5 367 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 MAFFQ9ULX9 164 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 LATO43561 262 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 AIREO43918 545 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 SOX14O95416 240 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 IMPDH1P20839 514 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 OLR1P78380 273 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 LMAN2Q12907 356 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 SPIN4Q56A73 249 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 GALPQ9UBC7 116 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 FAM240BA0A1B0GVZ2 78 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 HEPACAM2A8MVW5 462 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 CEACAM20Q6UY09 585 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF101Q8IZC7 436 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PLEKHA6Q9Y2H5 1048 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PRAMEF33A0A0G2JMD5 474 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 C5orf51A6NDU8 294 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PRAMEF10O60809 474 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 DNAJA2O60884 412 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 COQ9O75208 318 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 HCKP08631 526 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF806P0C7X5 589 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 AQP4P55087 323 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 UPP1Q16831 310 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ADNP2Q6IQ32 1131 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 LRRC70Q7Z2Q7 622 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF514Q96K75 400 aaPredicted RBP10.88□□□□□ -0.67
LINC00346-201ENST00000538077 CCDC115Q96NT0 180 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 TM9SF2Q99805 663 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PAAF1Q9BRP4 392 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 GRHPRQ9UBQ7 328 aa10.88□□□□□ -0.67
LINC00346-201ENST00000538077 PRORSD1PA6NEY8 169 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 A8MT66 165 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 H7BY64 318 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 J3QRK9 145 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 LCA5LO95447 670 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 HNF1BP35680 557 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 MTTPP55157 894 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ELOCQ15369 112 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms