RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 SERPINA11Q86U17 422 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 PLD3Q8IV08 490 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 FBXO22Q8NEZ5 403 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 MYLIPQ8WY64 445 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 KLF16Q9BXK1 252 aaPredicted RBP13.63□□□□□ -0.23
CLPB-209ENST00000538039 ELOVL6Q9H5J4 265 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 CWH43Q9H720 699 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 SCN3BQ9NY72 215 aa13.63□□□□□ -0.23
CLPB-209ENST00000538039 SAMD4AQ9UPU9 718 aaKnown RBP13.63□□□□□ -0.23
CLPB-209ENST00000538039 LOC100506127A0A0U1RQW1 187 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 PSMD11O00231 422 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 AIREO43918 545 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 GPX2P18283 190 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 TCEA1P23193 301 aaKnown RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 RRM2P31350 389 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 FLT3LGP49771 235 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 TTLL9Q3SXZ7 439 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CCSMST1Q4G0I0 132 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 COX20Q5RI15 118 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CERS6Q6ZMG9 384 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 TMEM150AQ86TG1 271 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 HORMAD1Q86X24 394 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 NXPE1Q8N323 547 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 KIAA1958Q8N8K9 716 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SETD9Q8NE22 299 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 DACH2Q96NX9 599 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 FEVQ99581 238 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SDHCQ99643 169 aaPredicted RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 PITX2Q99697 317 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 COPS4Q9BT78 406 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 TMEM202A6NGA9 273 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 AGAP5A6NIR3 686 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 AP3D1O14617 1153 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SEPT4O43236 478 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 POU2F1P14859 743 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 LHCGRP22888 699 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 PAX3P23760 479 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 KIR3DL1P43629 444 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 LIMK1P53667 647 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 MTAPQ13126 283 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 DDX39BQ13838 428 aaKnown RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 SMU1Q2TAY7 513 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 PROX2Q3B8N5 592 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLPB-209ENST00000538039 UBE2R2Q712K3 238 aaPredicted RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 CYP2U1Q7Z449 544 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 PARP16Q8N5Y8 322 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SLC5A8Q8N695 610 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SLC38A4Q969I6 547 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 TBC1D20Q96BZ9 403 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 ZNF226Q9NYT6 803 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 ZNF106Q9H2Y7 1883 aaKnown RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 DOCK6Q96HP0 2047 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 BNIP3LO60238 219 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 STK19P49842 368 aaPredicted RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 IRF3Q14653 427 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 DUOXA1Q1HG43 343 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 C6orf183Q5T699 404 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 RNF165Q6ZSG1 346 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CHST9Q7L1S5 443 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 GDPD3Q7L5L3 318 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 WDR53Q7Z5U6 358 aaPredicted RBP13.62□□□□□ -0.23
CLPB-209ENST00000538039 NAGSQ8N159 534 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 SYNPOQ8N3V7 929 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 POC5Q8NA72 575 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 HRASLS5Q96KN8 279 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 RUBCNLQ9H714 662 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 KIF17Q9P2E2 1029 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 PSORS1C1Q9UIG5 152 aa13.62□□□□□ -0.23
CLPB-209ENST00000538039 CLDN24A6NM45 220 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 KRT6AP02538 564 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 KRT6BP04259 564 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 ABCB1P08183 1280 aaPredicted RBP13.61□□□□□ -0.23
CLPB-209ENST00000538039 C1SP09871 688 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 PPP3CCP48454 512 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 KRT6CP48668 564 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 RAE1P78406 368 aaKnown RBP13.61□□□□□ -0.23
CLPB-209ENST00000538039 PTSQ03393 145 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 FADDQ13158 208 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 PLD1Q13393 1074 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 KLHL17Q6TDP4 642 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 EIF3MQ7L2H7 374 aaKnown RBP13.61□□□□□ -0.23
CLPB-209ENST00000538039 LILRA3Q8N6C8 439 aaPredicted RBP13.61□□□□□ -0.23
CLPB-209ENST00000538039 APOL4Q9BPW4 351 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 RSPO3Q9BXY4 272 aaPredicted RBP13.61□□□□□ -0.23
CLPB-209ENST00000538039 ITPAQ9BY32 194 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLPB-209ENST00000538039 RMND5AQ9H871 391 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 RDH14Q9HBH5 336 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 NMRK2Q9NPI5 230 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 EXO1Q9UQ84 846 aaKnown RBP13.61□□□□□ -0.23
CLPB-209ENST00000538039 GABRR3A8MPY1 467 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 MAGEB17A8MXT2 336 aa13.61□□□□□ -0.23
CLPB-209ENST00000538039 GBAP04062 536 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms