RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LAPTM5Q13571 262 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 SLBPQ14493 270 aaKnown RBP eCLIP23.25■■□□□ 1.31
HMGA2-208ENST00000537429 PAGE2BQ5JRK9 111 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 FBXO42Q6P3S6 717 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 RGS9BPQ6ZS82 235 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 CUZD1Q86UP6 607 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 RCBTB1Q8NDN9 531 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 MAGEB10Q96LZ2 347 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-208ENST00000537429 SORT1Q99523 831 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 TRPS1Q9UHF7 1281 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 PILRAQ9UKJ1 303 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 CNOT1A5YKK6 2376 aaKnown RBP23.25■■□□□ 1.31
HMGA2-208ENST00000537429 KCNE1BA0A087WTH5 132 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 HAT1O14929 419 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 CTSVO60911 334 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 HSPA4LO95757 839 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 NELFEP18615 380 aaKnown RBP23.24■■□□□ 1.31
HMGA2-208ENST00000537429 CXCR2P25025 360 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 CCKBRP32239 447 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 GRK3P35626 688 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 ARL4DP49703 201 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 CLDN6P56747 220 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 HSD11B2P80365 405 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 MYLK4Q86YV6 388 aaPredicted RBP23.24■■□□□ 1.31
HMGA2-208ENST00000537429 PLD3Q8IV08 490 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 PITHD1Q9GZP4 211 aaPredicted RBP23.24■■□□□ 1.31
HMGA2-208ENST00000537429 NT5DC2Q9H857 520 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 PDE7BQ9NP56 450 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 SOHLH2Q9NX45 425 aa23.24■■□□□ 1.31
HMGA2-208ENST00000537429 ZNF490Q9ULM2 529 aaPredicted RBP23.24■■□□□ 1.31
HMGA2-208ENST00000537429 TRBC2A0A5B9 178 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 FEZF1A0PJY2 475 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 AGRPO00253 132 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 MAP3K7O43318 606 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 LCMT2O60294 686 aaKnown RBP23.23■■□□□ 1.31
HMGA2-208ENST00000537429 FGF4P08620 206 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 HGFP14210 728 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 GYS2P54840 703 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 INHBCP55103 352 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 OCRLQ01968 901 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 CPSF6Q16630 551 aaKnown RBP eCLIP23.23■■□□□ 1.31
HMGA2-208ENST00000537429 TMIGD1Q6UXZ0 262 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 RNF44Q7L0R7 432 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 KRT78Q8N1N4 520 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 D2HGDHQ8N465 521 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 DNAJC22Q8N4W6 341 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 PRR11Q96HE9 360 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-208ENST00000537429 CCDC134Q9H6E4 229 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 HAO1Q9UJM8 370 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 H0YIV9 168 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 MT-CO3P00414 261 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 ENO1P06733 434 aaKnown RBP23.23■■□□□ 1.31
HMGA2-208ENST00000537429 FOXA1P55317 472 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 HIST2H2ACQ16777 129 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-208ENST00000537429 HES3Q5TGS1 186 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 HIST2H2AA3Q6FI13 130 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 LAS2Q8IYD9 372 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 CDYL2Q8N8U2 506 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 FCRL4Q96PJ5 515 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 ZFYVE21Q9BQ24 234 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 DLL3Q9NYJ7 618 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 ZDHHC2Q9UIJ5 367 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-208ENST00000537429 RAP2CQ9Y3L5 183 aa23.23■■□□□ 1.31
HMGA2-208ENST00000537429 CAPN1P07384 714 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 MLLT3P42568 568 aaPredicted RBP23.22■■□□□ 1.31
HMGA2-208ENST00000537429 SCTRP47872 440 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 GABRA4P48169 554 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 RPS15AP62244 130 aaKnown RBP23.22■■□□□ 1.31
HMGA2-208ENST00000537429 ZRSR2Q15696 482 aaKnown RBP23.22■■□□□ 1.31
HMGA2-208ENST00000537429 ISXQ2M1V0 245 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 TTC19Q6DKK2 380 aaPredicted RBP23.22■■□□□ 1.31
HMGA2-208ENST00000537429 MED27Q6P2C8 311 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 ANKRD53Q8N9V6 530 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 OR7G3Q8NG95 312 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 METTL6Q8TCB7 284 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 OR2A5Q96R48 311 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 KCNA7Q96RP8 456 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 ILKAPQ9H0C8 392 aaPredicted RBP23.22■■□□□ 1.31
HMGA2-208ENST00000537429 SYNPO2LQ9H987 977 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 PCDHGA11Q9Y5H2 935 aa23.22■■□□□ 1.31
HMGA2-208ENST00000537429 A0A0J9YVX5 310 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 POLR3GO15318 223 aaPredicted RBP23.21■■□□□ 1.31
HMGA2-208ENST00000537429 HCRTR1O43613 425 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 OR1F1O43749 312 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 MSL3P1P0C860 447 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 BCL6P41182 706 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 C16orf72Q14CZ0 275 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 RBBP5Q15291 538 aaKnown RBP23.21■■□□□ 1.31
HMGA2-208ENST00000537429 ZC3H12BQ5HYM0 836 aaKnown RBP23.21■■□□□ 1.31
HMGA2-208ENST00000537429 SH2D4BQ5SQS7 431 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 FAM219BQ5XKK7 198 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 TBC1D19Q8N5T2 526 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 ZNF781Q8N8C0 355 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 UBE2E3Q969T4 207 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 DEPDC7Q96QD5 511 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 SLCO1B3Q9NPD5 702 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 CLCA2Q9UQC9 943 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 TRAF6Q9Y4K3 522 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 TIMM22Q9Y584 194 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms